Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Traf1P39428 Gm14897-201ENSMUST00000118213 207 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Gm13085-201ENSMUST00000118356 171 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Traf1P39428 Gm14069-201ENSMUST00000120815 229 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Gm14841-201ENSMUST00000121067 758 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Gm11456-201ENSMUST00000121070 256 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Gm23213-201ENSMUST00000122715 313 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Gm26275-201ENSMUST00000157101 268 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Gm26406-201ENSMUST00000158503 124 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Gm17377-201ENSMUST00000165184 207 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Gm22584-201ENSMUST00000177935 92 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Gm23269-201ENSMUST00000178701 107 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Mir8106-201ENSMUST00000184520 139 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Gm28755-201ENSMUST00000185773 199 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Gm9696-202ENSMUST00000191541 830 ntBASIC3.32□□□□□ -1.88
Traf1P39428 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Gm45049-201ENSMUST00000207586 591 ntBASIC3.32□□□□□ -1.88
Traf1P39428 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.32□□□□□ -1.88
Traf1P39428 AC192616.1-201ENSMUST00000221922 132 ntBASIC3.32□□□□□ -1.88
Traf1P39428 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Traf1P39428 Mir137-201ENSMUST00000083635 73 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Gm25411-201ENSMUST00000083760 151 ntBASIC3.32□□□□□ -1.88
Traf1P39428 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Traf1P39428 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Traf1P39428 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Traf1P39428 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Traf1P39428 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Traf1P39428 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Traf1P39428 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Traf1P39428 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Traf1P39428 Gm12598-201ENSMUST00000117333 830 ntBASIC3.31□□□□□ -1.88
Traf1P39428 Gm13349-201ENSMUST00000118436 411 ntBASIC3.31□□□□□ -1.88
Traf1P39428 Gm14835-201ENSMUST00000119039 315 ntBASIC3.31□□□□□ -1.88
Traf1P39428 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC3.31□□□□□ -1.88
Traf1P39428 Gm15223-201ENSMUST00000120989 826 ntBASIC3.31□□□□□ -1.88
Traf1P39428 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.31□□□□□ -1.88
Traf1P39428 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
Traf1P39428 Gm22141-201ENSMUST00000157403 277 ntBASIC3.31□□□□□ -1.88
Traf1P39428 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3.31□□□□□ -1.88
Traf1P39428 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.31□□□□□ -1.88
Traf1P39428 Gm36984-201ENSMUST00000192770 235 ntBASIC3.31□□□□□ -1.88
Traf1P39428 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.31□□□□□ -1.88
Traf1P39428 Gm44754-201ENSMUST00000208155 400 ntBASIC3.31□□□□□ -1.88
Traf1P39428 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.31□□□□□ -1.88
Traf1P39428 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Traf1P39428 Gm24490-201ENSMUST00000083803 98 ntBASIC3.31□□□□□ -1.88
Traf1P39428 Gm5670-201ENSMUST00000093546 372 ntBASIC3.31□□□□□ -1.88
Traf1P39428 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Traf1P39428 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.31□□□□□ -1.88
Traf1P39428 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Traf1P39428 Snord116l9-201ENSMUST00000101891 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm26504-201ENSMUST00000102033 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm23744-201ENSMUST00000104231 149 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm13356-201ENSMUST00000121678 335 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm26424-201ENSMUST00000122530 104 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm6265-201ENSMUST00000149263 231 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm24691-201ENSMUST00000157762 140 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm25706-201ENSMUST00000157828 247 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm26214-201ENSMUST00000158581 107 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC3.3□□□□□ -1.88
Traf1P39428 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Traf1P39428 Gm26502-201ENSMUST00000177732 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Snord116l13-201ENSMUST00000177737 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm25350-201ENSMUST00000177849 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm23446-201ENSMUST00000177977 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm26201-201ENSMUST00000178047 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm24711-201ENSMUST00000178062 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm24609-201ENSMUST00000178166 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm23265-201ENSMUST00000178321 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm22812-201ENSMUST00000178329 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm26246-201ENSMUST00000178388 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm25155-201ENSMUST00000178450 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm24760-201ENSMUST00000178530 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm22285-201ENSMUST00000178576 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm22417-201ENSMUST00000178656 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm26270-201ENSMUST00000178690 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm23313-201ENSMUST00000178931 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm23089-201ENSMUST00000178947 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm24153-201ENSMUST00000179280 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm25597-201ENSMUST00000179388 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm25816-201ENSMUST00000179764 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm26188-201ENSMUST00000179963 94 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms