Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm3104-201ENSMUST00000171004 473 ntBASIC2.37□□□□□ -2.03
P20040 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
P20040 Gm29553-201ENSMUST00000189692 279 ntBASIC2.37□□□□□ -2.03
P20040 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.37□□□□□ -2.03
P20040 Gm42805-201ENSMUST00000196158 276 ntBASIC2.37□□□□□ -2.03
P20040 Gm43355-201ENSMUST00000196541 346 ntBASIC2.37□□□□□ -2.03
P20040 Gm34314-201ENSMUST00000203622 367 ntBASIC2.37□□□□□ -2.03
P20040 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.37□□□□□ -2.03
P20040 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC2.37□□□□□ -2.03
P20040 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.37□□□□□ -2.03
P20040 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
P20040 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
P20040 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
P20040 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.37□□□□□ -2.03
P20040 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
P20040 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
P20040 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
P20040 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
P20040 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
P20040 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.37□□□□□ -2.03
P20040 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
P20040 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
P20040 Gm25500-201ENSMUST00000104426 123 ntBASIC2.36□□□□□ -2.03
P20040 Gm22486-201ENSMUST00000116815 137 ntBASIC2.36□□□□□ -2.03
P20040 Gm13806-201ENSMUST00000117822 325 ntBASIC2.36□□□□□ -2.03
P20040 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC2.36□□□□□ -2.03
P20040 DQ267100-201ENSMUST00000122600 72 ntBASIC2.36□□□□□ -2.03
P20040 Gm25294-201ENSMUST00000122791 104 ntBASIC2.36□□□□□ -2.03
P20040 Gm22452-201ENSMUST00000122804 104 ntBASIC2.36□□□□□ -2.03
P20040 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.36□□□□□ -2.03
P20040 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.36□□□□□ -2.03
P20040 Gm24443-201ENSMUST00000157242 132 ntBASIC2.36□□□□□ -2.03
P20040 Gm25280-201ENSMUST00000157269 101 ntBASIC2.36□□□□□ -2.03
P20040 Gm23588-201ENSMUST00000157659 99 ntBASIC2.36□□□□□ -2.03
P20040 Mir3066-201ENSMUST00000175296 83 ntBASIC2.36□□□□□ -2.03
P20040 Mir6382-201ENSMUST00000184055 110 ntBASIC2.36□□□□□ -2.03
P20040 Gm27505-201ENSMUST00000185071 110 ntBASIC2.36□□□□□ -2.03
P20040 Gm28163-201ENSMUST00000187099 325 ntBASIC2.36□□□□□ -2.03
P20040 Gm9696-202ENSMUST00000191541 830 ntBASIC2.36□□□□□ -2.03
P20040 Gm18691-201ENSMUST00000203593 872 ntBASIC2.36□□□□□ -2.03
P20040 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.36□□□□□ -2.03
P20040 Gm45288-201ENSMUST00000210236 151 ntBASIC2.36□□□□□ -2.03
P20040 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
P20040 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.36□□□□□ -2.03
P20040 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.36□□□□□ -2.03
P20040 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
P20040 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
P20040 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
P20040 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
P20040 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
P20040 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
P20040 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
P20040 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
P20040 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
P20040 Gm26377-201ENSMUST00000102184 108 ntBASIC2.35□□□□□ -2.03
P20040 Gm14932-201ENSMUST00000117112 453 ntBASIC2.35□□□□□ -2.03
P20040 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.35□□□□□ -2.03
P20040 Gm15113-201ENSMUST00000119280 836 ntBASIC2.35□□□□□ -2.03
P20040 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
P20040 Gm24768-201ENSMUST00000158512 94 ntBASIC2.35□□□□□ -2.03
P20040 Gm8207-201ENSMUST00000171204 502 ntBASIC2.35□□□□□ -2.03
P20040 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.35□□□□□ -2.03
P20040 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC2.35□□□□□ -2.03
P20040 Mir6353-201ENSMUST00000183596 113 ntBASIC2.35□□□□□ -2.03
P20040 Mir7242-201ENSMUST00000183710 79 ntBASIC2.35□□□□□ -2.03
P20040 Gm28647-201ENSMUST00000188416 197 ntBASIC2.35□□□□□ -2.03
P20040 Gm29263-201ENSMUST00000188718 463 ntBASIC2.35□□□□□ -2.03
P20040 Gm28384-201ENSMUST00000189079 463 ntBASIC2.35□□□□□ -2.03
P20040 Gm36966-201ENSMUST00000192217 413 ntBASIC2.35□□□□□ -2.03
P20040 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.35□□□□□ -2.03
P20040 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.35□□□□□ -2.03
P20040 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.35□□□□□ -2.03
P20040 Gm32222-201ENSMUST00000203296 298 ntBASIC2.35□□□□□ -2.03
P20040 Gm44295-201ENSMUST00000203805 437 ntBASIC2.35□□□□□ -2.03
P20040 Gm44050-201ENSMUST00000204263 527 ntBASIC2.35□□□□□ -2.03
P20040 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.35□□□□□ -2.03
P20040 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.35□□□□□ -2.03
P20040 Gm18346-201ENSMUST00000216782 325 ntBASIC2.35□□□□□ -2.03
P20040 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.35□□□□□ -2.03
P20040 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
P20040 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.35□□□□□ -2.03
P20040 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.35□□□□□ -2.03
P20040 Gm23645-201ENSMUST00000083228 108 ntBASIC2.35□□□□□ -2.03
P20040 Mir19a-201ENSMUST00000083482 82 ntBASIC2.35□□□□□ -2.03
P20040 Zfp640-202ENSMUST00000224116 1562 ntBASIC2.35□□□□□ -2.03
P20040 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
P20040 AC162910.1-201ENSMUST00000221219 1723 ntBASIC2.34□□□□□ -2.03
P20040 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
P20040 Snora36b-201ENSMUST00000104383 132 ntBASIC2.34□□□□□ -2.03
P20040 Gm12386-201ENSMUST00000117380 688 ntBASIC2.34□□□□□ -2.03
P20040 Gm14868-201ENSMUST00000117840 216 ntBASIC2.34□□□□□ -2.03
P20040 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
P20040 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.34□□□□□ -2.03
P20040 Gm14736-201ENSMUST00000121470 336 ntBASIC2.34□□□□□ -2.03
P20040 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.34□□□□□ -2.03
P20040 Gm23111-201ENSMUST00000122652 105 ntBASIC2.34□□□□□ -2.03
P20040 Gm23118-201ENSMUST00000122657 187 ntBASIC2.34□□□□□ -2.03
P20040 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.34□□□□□ -2.03
P20040 Gm23559-201ENSMUST00000157824 103 ntBASIC2.34□□□□□ -2.03
P20040 Gm24436-201ENSMUST00000157889 302 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 133.1 ms