Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC4.67□□□□□ -1.66
RaraP11416 Gm26279-201ENSMUST00000157095 102 ntBASIC4.67□□□□□ -1.66
RaraP11416 Gm24005-201ENSMUST00000158459 296 ntBASIC4.67□□□□□ -1.66
RaraP11416 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.67□□□□□ -1.66
RaraP11416 Gm23355-201ENSMUST00000177614 107 ntBASIC4.67□□□□□ -1.66
RaraP11416 Gm23966-201ENSMUST00000179823 107 ntBASIC4.67□□□□□ -1.66
RaraP11416 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC4.67□□□□□ -1.66
RaraP11416 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.67□□□□□ -1.66
RaraP11416 Gm23148-201ENSMUST00000180367 107 ntBASIC4.67□□□□□ -1.66
RaraP11416 Gm44533-201ENSMUST00000207782 268 ntBASIC4.67□□□□□ -1.66
RaraP11416 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.67□□□□□ -1.66
RaraP11416 Gm18921-201ENSMUST00000221798 366 ntBASIC4.67□□□□□ -1.66
RaraP11416 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC4.67□□□□□ -1.66
RaraP11416 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.67□□□□□ -1.66
RaraP11416 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.67□□□□□ -1.66
RaraP11416 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RaraP11416 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RaraP11416 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
RaraP11416 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RaraP11416 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RaraP11416 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RaraP11416 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RaraP11416 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RaraP11416 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RaraP11416 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RaraP11416 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RaraP11416 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RaraP11416 Gm22473-201ENSMUST00000104114 132 ntBASIC4.66□□□□□ -1.66
RaraP11416 Gm15148-201ENSMUST00000117602 156 ntBASIC4.66□□□□□ -1.66
RaraP11416 Gm16128-201ENSMUST00000117855 626 ntBASIC4.66□□□□□ -1.66
RaraP11416 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.66□□□□□ -1.66
RaraP11416 Gm25054-201ENSMUST00000157370 97 ntBASIC4.66□□□□□ -1.66
RaraP11416 Gm25664-201ENSMUST00000157697 107 ntBASIC4.66□□□□□ -1.66
RaraP11416 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.66□□□□□ -1.66
RaraP11416 Gm28148-201ENSMUST00000186924 697 ntBASIC4.66□□□□□ -1.66
RaraP11416 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.66□□□□□ -1.66
RaraP11416 Gm43529-201ENSMUST00000199178 412 ntBASIC4.66□□□□□ -1.66
RaraP11416 Gm6615-201ENSMUST00000199426 631 ntBASIC4.66□□□□□ -1.66
RaraP11416 Gm43730-201ENSMUST00000199863 372 ntBASIC4.66□□□□□ -1.66
RaraP11416 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.66□□□□□ -1.66
RaraP11416 Gm9616-201ENSMUST00000221154 781 ntBASIC4.66□□□□□ -1.66
RaraP11416 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.66□□□□□ -1.66
RaraP11416 AC164304.1-201ENSMUST00000226920 272 ntBASIC4.66□□□□□ -1.66
RaraP11416 Gm26457-201ENSMUST00000082678 78 ntBASIC4.66□□□□□ -1.66
RaraP11416 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.66□□□□□ -1.66
RaraP11416 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
RaraP11416 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RaraP11416 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RaraP11416 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.66□□□□□ -1.66
RaraP11416 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.66□□□□□ -1.66
RaraP11416 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RaraP11416 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
RaraP11416 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
RaraP11416 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RaraP11416 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RaraP11416 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
RaraP11416 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
RaraP11416 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
RaraP11416 Gm26500-201ENSMUST00000101867 106 ntBASIC4.65□□□□□ -1.67
RaraP11416 Gm24671-201ENSMUST00000104159 158 ntBASIC4.65□□□□□ -1.67
RaraP11416 Gm24586-201ENSMUST00000116695 89 ntBASIC4.65□□□□□ -1.67
RaraP11416 Gm13714-201ENSMUST00000117313 221 ntBASIC4.65□□□□□ -1.67
RaraP11416 Gm14119-201ENSMUST00000119511 235 ntBASIC4.65□□□□□ -1.67
RaraP11416 Gm22984-201ENSMUST00000122751 122 ntBASIC4.65□□□□□ -1.67
RaraP11416 Gm25834-201ENSMUST00000158916 101 ntBASIC4.65□□□□□ -1.67
RaraP11416 Gm19898-201ENSMUST00000177490 251 ntBASIC4.65□□□□□ -1.67
RaraP11416 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RaraP11416 Mir8106-201ENSMUST00000184520 139 ntBASIC4.65□□□□□ -1.67
RaraP11416 Gm29429-201ENSMUST00000187071 121 ntBASIC4.65□□□□□ -1.67
RaraP11416 Gm19123-201ENSMUST00000190716 651 ntBASIC4.65□□□□□ -1.67
RaraP11416 Gm37713-201ENSMUST00000191746 198 ntBASIC4.65□□□□□ -1.67
RaraP11416 Gm37763-201ENSMUST00000193445 120 ntBASIC4.65□□□□□ -1.67
RaraP11416 Gm5876-201ENSMUST00000203735 243 ntBASIC4.65□□□□□ -1.67
RaraP11416 Gm19908-201ENSMUST00000204684 391 ntBASIC4.65□□□□□ -1.67
RaraP11416 Gm19096-201ENSMUST00000209705 766 ntBASIC4.65□□□□□ -1.67
RaraP11416 Gm8942-201ENSMUST00000217892 400 ntBASIC4.65□□□□□ -1.67
RaraP11416 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.65□□□□□ -1.67
RaraP11416 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.65□□□□□ -1.67
RaraP11416 Gm25078-201ENSMUST00000082530 107 ntBASIC4.65□□□□□ -1.67
RaraP11416 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.65□□□□□ -1.67
RaraP11416 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RaraP11416 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RaraP11416 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RaraP11416 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RaraP11416 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.64□□□□□ -1.67
RaraP11416 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RaraP11416 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RaraP11416 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
RaraP11416 Gm15846-201ENSMUST00000116022 320 ntBASIC4.64□□□□□ -1.67
RaraP11416 Gm12379-201ENSMUST00000119607 391 ntBASIC4.64□□□□□ -1.67
RaraP11416 Gm14810-201ENSMUST00000121628 486 ntBASIC4.64□□□□□ -1.67
RaraP11416 Gm8200-201ENSMUST00000122390 222 ntBASIC4.64□□□□□ -1.67
RaraP11416 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC4.64□□□□□ -1.67
RaraP11416 Gm24113-201ENSMUST00000157477 276 ntBASIC4.64□□□□□ -1.67
RaraP11416 Gm23752-201ENSMUST00000157584 115 ntBASIC4.64□□□□□ -1.67
RaraP11416 Gm25427-201ENSMUST00000157605 103 ntBASIC4.64□□□□□ -1.67
RaraP11416 Gm26362-201ENSMUST00000158865 315 ntBASIC4.64□□□□□ -1.67
RaraP11416 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RaraP11416 Gm18520-201ENSMUST00000174783 658 ntBASIC4.64□□□□□ -1.67
RaraP11416 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms