Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.92□□□□□ -1.94
Lire1P11260 Gm44524-201ENSMUST00000203899 271 ntBASIC2.92□□□□□ -1.94
Lire1P11260 Gm45101-201ENSMUST00000208327 232 ntBASIC2.92□□□□□ -1.94
Lire1P11260 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.92□□□□□ -1.94
Lire1P11260 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.92□□□□□ -1.94
Lire1P11260 AC113305.1-201ENSMUST00000214664 724 ntBASIC2.92□□□□□ -1.94
Lire1P11260 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC2.92□□□□□ -1.94
Lire1P11260 AC125464.1-201ENSMUST00000228013 512 ntBASIC2.92□□□□□ -1.94
Lire1P11260 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC2.92□□□□□ -1.94
Lire1P11260 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Lire1P11260 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Lire1P11260 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Lire1P11260 Gm24948-201ENSMUST00000082866 207 ntBASIC2.92□□□□□ -1.94
Lire1P11260 Gm23645-201ENSMUST00000083228 108 ntBASIC2.92□□□□□ -1.94
Lire1P11260 Gm23741-201ENSMUST00000097237 171 ntBASIC2.92□□□□□ -1.94
Lire1P11260 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.92□□□□□ -1.94
Lire1P11260 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.92□□□□□ -1.94
Lire1P11260 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Lire1P11260 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.91□□□□□ -1.94
Lire1P11260 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
Lire1P11260 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Lire1P11260 Gm12617-201ENSMUST00000121268 381 ntBASIC2.91□□□□□ -1.94
Lire1P11260 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC2.91□□□□□ -1.94
Lire1P11260 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.91□□□□□ -1.94
Lire1P11260 Gm24475-201ENSMUST00000157435 143 ntBASIC2.91□□□□□ -1.94
Lire1P11260 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Lire1P11260 Gm28002-201ENSMUST00000184832 100 ntBASIC2.91□□□□□ -1.94
Lire1P11260 Mir6363-201ENSMUST00000184880 114 ntBASIC2.91□□□□□ -1.94
Lire1P11260 Gm20058-201ENSMUST00000186939 284 ntBASIC2.91□□□□□ -1.94
Lire1P11260 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.91□□□□□ -1.94
Lire1P11260 Gm19193-201ENSMUST00000190263 590 ntBASIC2.91□□□□□ -1.94
Lire1P11260 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.91□□□□□ -1.94
Lire1P11260 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.91□□□□□ -1.94
Lire1P11260 Gm19140-201ENSMUST00000209790 421 ntBASIC2.91□□□□□ -1.94
Lire1P11260 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.91□□□□□ -1.94
Lire1P11260 AC154424.1-201ENSMUST00000225883 799 ntBASIC2.91□□□□□ -1.94
Lire1P11260 AC164597.2-201ENSMUST00000226738 603 ntBASIC2.91□□□□□ -1.94
Lire1P11260 AC156574.2-201ENSMUST00000228023 282 ntBASIC2.91□□□□□ -1.94
Lire1P11260 Olfr815-201ENSMUST00000071557 951 ntBASIC2.91□□□□□ -1.94
Lire1P11260 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
Lire1P11260 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.9□□□□□ -1.95
Lire1P11260 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.9□□□□□ -1.95
Lire1P11260 Gm14428-201ENSMUST00000120408 822 ntBASIC2.9□□□□□ -1.95
Lire1P11260 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Lire1P11260 Gm24908-201ENSMUST00000157294 127 ntBASIC2.9□□□□□ -1.95
Lire1P11260 Gm3221-201ENSMUST00000164869 440 ntBASIC2.9□□□□□ -1.95
Lire1P11260 Gm29429-201ENSMUST00000187071 121 ntBASIC2.9□□□□□ -1.95
Lire1P11260 Gm44393-201ENSMUST00000197418 138 ntBASIC2.9□□□□□ -1.95
Lire1P11260 Gm44254-201ENSMUST00000204184 322 ntBASIC2.9□□□□□ -1.95
Lire1P11260 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.9□□□□□ -1.95
Lire1P11260 AC168880.1-201ENSMUST00000225113 707 ntBASIC2.9□□□□□ -1.95
Lire1P11260 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.9□□□□□ -1.95
Lire1P11260 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.9□□□□□ -1.95
Lire1P11260 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Lire1P11260 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Lire1P11260 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Lire1P11260 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Lire1P11260 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Lire1P11260 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
Lire1P11260 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Gm12878-201ENSMUST00000118744 332 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Gm14629-201ENSMUST00000122428 144 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Gm26256-201ENSMUST00000122499 186 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.89□□□□□ -1.95
Lire1P11260 Gm26105-201ENSMUST00000157253 190 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Gm2855-201ENSMUST00000166765 456 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Gm24819-201ENSMUST00000175094 166 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Gm25470-201ENSMUST00000175576 111 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Lire1P11260 Gm27761-201ENSMUST00000184091 131 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Mir6917-201ENSMUST00000184111 61 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Gm28163-201ENSMUST00000187099 325 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Gm37102-201ENSMUST00000195740 1105 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Gm6510-201ENSMUST00000195916 574 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Gm43286-201ENSMUST00000197420 424 ntBASIC2.89□□□□□ -1.95
Lire1P11260 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Amd-ps5-201ENSMUST00000198406 989 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Gm43992-201ENSMUST00000204358 197 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Gm44903-201ENSMUST00000206840 130 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Gm45344-201ENSMUST00000211610 341 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Lire1P11260 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Lire1P11260 Gm46233-201ENSMUST00000217831 449 ntBASIC2.89□□□□□ -1.95
Lire1P11260 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Lire1P11260 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Lire1P11260 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Lire1P11260 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Lire1P11260 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Lire1P11260 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Lire1P11260 Gm22939-201ENSMUST00000103958 131 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm13331-201ENSMUST00000117500 448 ntBASIC2.88□□□□□ -1.95
Lire1P11260 AA413626-201ENSMUST00000121125 494 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.88□□□□□ -1.95
Lire1P11260 Gm24716-201ENSMUST00000157524 104 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm22961-201ENSMUST00000157964 106 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm22483-201ENSMUST00000157986 274 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm22611-201ENSMUST00000158288 150 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm17064-201ENSMUST00000167690 452 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms