Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm6664-201ENSMUST00000119138 468 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 Gm15106-201ENSMUST00000119691 821 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 Gm13406-201ENSMUST00000121991 256 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 Gm24086-201ENSMUST00000175171 98 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.57□□□□□ -2
Chmp6P0C0A3 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC2.57□□□□□ -2
Chmp6P0C0A3 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.57□□□□□ -2
Chmp6P0C0A3 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Chmp6P0C0A3 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.57□□□□□ -2
Chmp6P0C0A3 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.57□□□□□ -2
Chmp6P0C0A3 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 Gm42665-201ENSMUST00000202100 586 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 Gm44615-201ENSMUST00000206548 358 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 AC131085.1-201ENSMUST00000224746 656 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.57□□□□□ -2
Chmp6P0C0A3 Gm23249-201ENSMUST00000083369 161 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.57□□□□□ -2
Chmp6P0C0A3 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.57□□□□□ -2
Chmp6P0C0A3 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Chmp6P0C0A3 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.56□□□□□ -2
Chmp6P0C0A3 Mir883a-201ENSMUST00000104824 76 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm13806-201ENSMUST00000117822 325 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm11460-201ENSMUST00000118200 361 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm14593-201ENSMUST00000119948 294 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm14815-201ENSMUST00000120060 488 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm22517-201ENSMUST00000158265 136 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm23005-201ENSMUST00000158950 136 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm6395-201ENSMUST00000167639 691 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC2.56□□□□□ -2
Chmp6P0C0A3 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm23190-201ENSMUST00000180307 64 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm38231-201ENSMUST00000192030 347 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm19694-201ENSMUST00000192364 505 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Mir3069-201ENSMUST00000198802 65 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm17893-201ENSMUST00000203017 770 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm45049-201ENSMUST00000207586 591 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm45445-201ENSMUST00000209586 232 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm8031-201ENSMUST00000213430 626 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Olfr815-201ENSMUST00000071557 951 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm26055-201ENSMUST00000083038 107 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Gm23733-201ENSMUST00000083750 106 ntBASIC2.56□□□□□ -2
Chmp6P0C0A3 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.55□□□□□ -2
Chmp6P0C0A3 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Chmp6P0C0A3 Gm26015-201ENSMUST00000104402 125 ntBASIC2.55□□□□□ -2
Chmp6P0C0A3 Gm13880-201ENSMUST00000118421 474 ntBASIC2.55□□□□□ -2
Chmp6P0C0A3 Gm15452-201ENSMUST00000119877 240 ntBASIC2.55□□□□□ -2
Chmp6P0C0A3 Mir1927-201ENSMUST00000158579 109 ntBASIC2.55□□□□□ -2
Chmp6P0C0A3 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.55□□□□□ -2
Chmp6P0C0A3 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.55□□□□□ -2
Chmp6P0C0A3 Mir3075-201ENSMUST00000175340 85 ntBASIC2.55□□□□□ -2
Chmp6P0C0A3 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.55□□□□□ -2
Chmp6P0C0A3 Gm5224-201ENSMUST00000183060 350 ntBASIC2.55□□□□□ -2
Chmp6P0C0A3 Gm27676-201ENSMUST00000183669 61 ntBASIC2.55□□□□□ -2
Chmp6P0C0A3 Gm27369-201ENSMUST00000185182 71 ntBASIC2.55□□□□□ -2
Chmp6P0C0A3 Gm44041-201ENSMUST00000203678 396 ntBASIC2.55□□□□□ -2
Chmp6P0C0A3 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.55□□□□□ -2
Chmp6P0C0A3 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.55□□□□□ -2
Chmp6P0C0A3 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Chmp6P0C0A3 Snord104-201ENSMUST00000083192 70 ntBASIC2.55□□□□□ -2
Chmp6P0C0A3 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Chmp6P0C0A3 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Chmp6P0C0A3 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.54□□□□□ -2
Chmp6P0C0A3 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm24274-201ENSMUST00000116787 124 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm23889-201ENSMUST00000122689 104 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm14368-201ENSMUST00000145305 415 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm23559-201ENSMUST00000157824 103 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm23642-201ENSMUST00000157858 258 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm15900-201ENSMUST00000161584 342 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.54□□□□□ -2
Chmp6P0C0A3 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Mir3092-201ENSMUST00000174954 96 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm26189-201ENSMUST00000179879 107 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.54□□□□□ -2
Chmp6P0C0A3 Mir8106-201ENSMUST00000184520 139 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms