Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Gm26002-201ENSMUST00000101915 107 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ApoeP08226 Gm11813-201ENSMUST00000118586 291 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Gm15760-201ENSMUST00000119553 283 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Gm15223-201ENSMUST00000120989 826 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Gm16412-201ENSMUST00000121602 273 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Gm12372-201ENSMUST00000121654 768 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Gm24210-201ENSMUST00000158263 133 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Gm10177-202ENSMUST00000161698 207 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Mir3066-201ENSMUST00000175296 83 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Gm28755-201ENSMUST00000185773 199 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Gm29263-201ENSMUST00000188718 463 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Gm28384-201ENSMUST00000189079 463 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.3□□□□□ -2.04
ApoeP08226 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
ApoeP08226 Gm43026-201ENSMUST00000202972 325 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Gm18488-201ENSMUST00000215082 364 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
ApoeP08226 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.3□□□□□ -2.04
ApoeP08226 AL590503.1-201ENSMUST00000222053 321 ntBASIC2.3□□□□□ -2.04
ApoeP08226 AC154788.1-201ENSMUST00000225003 340 ntBASIC2.3□□□□□ -2.04
ApoeP08226 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ApoeP08226 Gm24610-201ENSMUST00000083270 109 ntBASIC2.3□□□□□ -2.04
ApoeP08226 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
ApoeP08226 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.29□□□□□ -2.04
ApoeP08226 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
ApoeP08226 Gm25539-201ENSMUST00000116886 122 ntBASIC2.29□□□□□ -2.04
ApoeP08226 Gm14652-201ENSMUST00000118479 235 ntBASIC2.29□□□□□ -2.04
ApoeP08226 Gm14352-201ENSMUST00000119250 449 ntBASIC2.29□□□□□ -2.04
ApoeP08226 Gm5287-201ENSMUST00000120666 598 ntBASIC2.29□□□□□ -2.04
ApoeP08226 Gm9225-201ENSMUST00000121921 836 ntBASIC2.29□□□□□ -2.04
ApoeP08226 Gm25557-201ENSMUST00000158084 315 ntBASIC2.29□□□□□ -2.04
ApoeP08226 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ApoeP08226 Gm2966-201ENSMUST00000166052 481 ntBASIC2.29□□□□□ -2.04
ApoeP08226 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.29□□□□□ -2.04
ApoeP08226 Gm23268-201ENSMUST00000175494 78 ntBASIC2.29□□□□□ -2.04
ApoeP08226 Gm25194-201ENSMUST00000177987 79 ntBASIC2.29□□□□□ -2.04
ApoeP08226 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.29□□□□□ -2.04
ApoeP08226 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.29□□□□□ -2.04
ApoeP08226 Gm44295-201ENSMUST00000203805 437 ntBASIC2.29□□□□□ -2.04
ApoeP08226 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.29□□□□□ -2.04
ApoeP08226 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.29□□□□□ -2.04
ApoeP08226 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ApoeP08226 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.29□□□□□ -2.04
ApoeP08226 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ApoeP08226 Gm22061-201ENSMUST00000082557 107 ntBASIC2.29□□□□□ -2.04
ApoeP08226 Gm24948-201ENSMUST00000082866 207 ntBASIC2.29□□□□□ -2.04
ApoeP08226 Gm26206-201ENSMUST00000082908 110 ntBASIC2.29□□□□□ -2.04
ApoeP08226 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
ApoeP08226 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
ApoeP08226 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
ApoeP08226 Gm37630-201ENSMUST00000194210 1456 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.28□□□□□ -2.04
ApoeP08226 Gm12156-201ENSMUST00000119188 554 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
ApoeP08226 Gm22452-201ENSMUST00000122804 104 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Gm22849-201ENSMUST00000157713 307 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Mir5099-201ENSMUST00000175257 74 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
ApoeP08226 Gm24137-201ENSMUST00000180055 79 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Gm25528-201ENSMUST00000180264 132 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Gm22391-201ENSMUST00000180356 79 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Gm28666-201ENSMUST00000186649 274 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Gm28951-201ENSMUST00000190742 313 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Gm32033-201ENSMUST00000193483 339 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Gm43652-201ENSMUST00000196219 675 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Gm18341-201ENSMUST00000197538 622 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Gm8041-201ENSMUST00000199755 616 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Gm43600-201ENSMUST00000202134 223 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.28□□□□□ -2.04
ApoeP08226 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.28□□□□□ -2.04
ApoeP08226 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.28□□□□□ -2.04
ApoeP08226 AC091260.1-201ENSMUST00000216112 229 ntBASIC2.28□□□□□ -2.04
ApoeP08226 AC159476.2-201ENSMUST00000216221 418 ntBASIC2.28□□□□□ -2.04
ApoeP08226 AC192334.2-201ENSMUST00000223087 1091 ntBASIC2.28□□□□□ -2.04
ApoeP08226 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.28□□□□□ -2.04
ApoeP08226 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.28□□□□□ -2.04
ApoeP08226 Gm25796-201ENSMUST00000082645 163 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
ApoeP08226 Gm23516-201ENSMUST00000093728 107 ntBASIC2.28□□□□□ -2.04
ApoeP08226 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
ApoeP08226 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.28□□□□□ -2.05
ApoeP08226 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
ApoeP08226 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ApoeP08226 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ApoeP08226 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.27□□□□□ -2.05
ApoeP08226 Gm6954-201ENSMUST00000117416 225 ntBASIC2.27□□□□□ -2.05
ApoeP08226 Gm13806-201ENSMUST00000117822 325 ntBASIC2.27□□□□□ -2.05
ApoeP08226 Gm13510-201ENSMUST00000118659 429 ntBASIC2.27□□□□□ -2.05
ApoeP08226 Gm15113-201ENSMUST00000119280 836 ntBASIC2.27□□□□□ -2.05
ApoeP08226 Gm25270-201ENSMUST00000122606 138 ntBASIC2.27□□□□□ -2.05
ApoeP08226 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ApoeP08226 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
ApoeP08226 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
ApoeP08226 Gm4540-201ENSMUST00000170669 429 ntBASIC2.27□□□□□ -2.05
ApoeP08226 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
ApoeP08226 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms