Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm29627-201ENSMUST00000187984 463 ntBASIC2.54□□□□□ -2
P06344 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.54□□□□□ -2
P06344 Gm29165-201ENSMUST00000190655 664 ntBASIC2.54□□□□□ -2
P06344 Gm29211-201ENSMUST00000191470 664 ntBASIC2.54□□□□□ -2
P06344 Gm43245-201ENSMUST00000197603 468 ntBASIC2.54□□□□□ -2
P06344 Gm18982-201ENSMUST00000198118 529 ntBASIC2.54□□□□□ -2
P06344 Gm43239-201ENSMUST00000200131 201 ntBASIC2.54□□□□□ -2
P06344 Gm18414-201ENSMUST00000210858 694 ntBASIC2.54□□□□□ -2
P06344 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.54□□□□□ -2
P06344 Gm2628-201ENSMUST00000218019 426 ntBASIC2.54□□□□□ -2
P06344 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.54□□□□□ -2
P06344 Gm23650-201ENSMUST00000083355 70 ntBASIC2.54□□□□□ -2
P06344 Gm23848-201ENSMUST00000083826 106 ntBASIC2.54□□□□□ -2
P06344 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
P06344 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
P06344 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
P06344 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
P06344 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.53□□□□□ -2
P06344 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
P06344 Mir499-201ENSMUST00000102357 79 ntBASIC2.53□□□□□ -2
P06344 Gm25376-201ENSMUST00000104340 133 ntBASIC2.53□□□□□ -2
P06344 Gm13720-201ENSMUST00000120741 196 ntBASIC2.53□□□□□ -2
P06344 Gm12096-201ENSMUST00000121149 829 ntBASIC2.53□□□□□ -2
P06344 Gm14578-201ENSMUST00000122166 391 ntBASIC2.53□□□□□ -2
P06344 Gm23206-201ENSMUST00000122720 184 ntBASIC2.53□□□□□ -2
P06344 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC2.53□□□□□ -2
P06344 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.53□□□□□ -2
P06344 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.53□□□□□ -2
P06344 Gm25621-201ENSMUST00000157223 114 ntBASIC2.53□□□□□ -2
P06344 Gm22141-201ENSMUST00000157403 277 ntBASIC2.53□□□□□ -2
P06344 Gm22597-201ENSMUST00000157602 80 ntBASIC2.53□□□□□ -2
P06344 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.53□□□□□ -2
P06344 Gm17166-201ENSMUST00000172006 431 ntBASIC2.53□□□□□ -2
P06344 Gm24713-201ENSMUST00000178850 107 ntBASIC2.53□□□□□ -2
P06344 Gm25448-201ENSMUST00000180065 107 ntBASIC2.53□□□□□ -2
P06344 Gm24306-201ENSMUST00000180229 79 ntBASIC2.53□□□□□ -2
P06344 Gm27527-201ENSMUST00000183903 99 ntBASIC2.53□□□□□ -2
P06344 Gm27520-201ENSMUST00000184872 81 ntBASIC2.53□□□□□ -2
P06344 Gm19641-201ENSMUST00000188432 417 ntBASIC2.53□□□□□ -2
P06344 Gm37727-201ENSMUST00000191637 819 ntBASIC2.53□□□□□ -2
P06344 Gm19177-201ENSMUST00000204520 613 ntBASIC2.53□□□□□ -2
P06344 Gm44030-201ENSMUST00000204865 432 ntBASIC2.53□□□□□ -2
P06344 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.53□□□□□ -2
P06344 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.53□□□□□ -2
P06344 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.53□□□□□ -2
P06344 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC2.53□□□□□ -2
P06344 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC2.53□□□□□ -2
P06344 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.53□□□□□ -2
P06344 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.53□□□□□ -2
P06344 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
P06344 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.53□□□□□ -2
P06344 Snora23-201ENSMUST00000082517 184 ntBASIC2.53□□□□□ -2
P06344 Gm22508-201ENSMUST00000082772 110 ntBASIC2.53□□□□□ -2
P06344 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
P06344 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
P06344 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
P06344 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
P06344 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
P06344 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.52□□□□□ -2.01
P06344 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
P06344 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
P06344 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
P06344 Gm25466-201ENSMUST00000103995 132 ntBASIC2.52□□□□□ -2.01
P06344 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
P06344 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.52□□□□□ -2.01
P06344 Gm9119-201ENSMUST00000118866 495 ntBASIC2.52□□□□□ -2.01
P06344 Gm15266-201ENSMUST00000119635 255 ntBASIC2.52□□□□□ -2.01
P06344 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.52□□□□□ -2.01
P06344 Gm22452-201ENSMUST00000122804 104 ntBASIC2.52□□□□□ -2.01
P06344 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
P06344 Gm24958-201ENSMUST00000158009 97 ntBASIC2.52□□□□□ -2.01
P06344 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC2.52□□□□□ -2.01
P06344 Gm17117-201ENSMUST00000163665 299 ntBASIC2.52□□□□□ -2.01
P06344 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.52□□□□□ -2.01
P06344 Gm22290-201ENSMUST00000177655 107 ntBASIC2.52□□□□□ -2.01
P06344 Gm22583-201ENSMUST00000178031 107 ntBASIC2.52□□□□□ -2.01
P06344 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
P06344 Gm11392-201ENSMUST00000181419 710 ntBASIC2.52□□□□□ -2.01
P06344 Mir6405-201ENSMUST00000184584 124 ntBASIC2.52□□□□□ -2.01
P06344 Gm37757-201ENSMUST00000193072 210 ntBASIC2.52□□□□□ -2.01
P06344 Gm37007-201ENSMUST00000194234 319 ntBASIC2.52□□□□□ -2.01
P06344 Gm19089-201ENSMUST00000197207 613 ntBASIC2.52□□□□□ -2.01
P06344 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.52□□□□□ -2.01
P06344 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.52□□□□□ -2.01
P06344 Gm44399-201ENSMUST00000205043 226 ntBASIC2.52□□□□□ -2.01
P06344 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.52□□□□□ -2.01
P06344 Gm45387-201ENSMUST00000209792 632 ntBASIC2.52□□□□□ -2.01
P06344 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC2.52□□□□□ -2.01
P06344 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
P06344 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.52□□□□□ -2.01
P06344 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.52□□□□□ -2.01
P06344 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.52□□□□□ -2.01
P06344 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.52□□□□□ -2.01
P06344 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
P06344 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
P06344 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
P06344 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
P06344 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.52□□□□□ -2.01
P06344 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
P06344 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms