| Hoxa3 | P02831 | Gm24978-201 | ENSMUST00000179782 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm24967-201 | ENSMUST00000179791 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm25173-201 | ENSMUST00000179794 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm24870-201 | ENSMUST00000179897 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm22288-201 | ENSMUST00000179904 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm22645-201 | ENSMUST00000180010 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm24565-201 | ENSMUST00000180099 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm23805-201 | ENSMUST00000180129 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm23512-201 | ENSMUST00000180237 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm25327-201 | ENSMUST00000180263 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm26058-201 | ENSMUST00000180294 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm22418-201 | ENSMUST00000180326 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm28920-201 | ENSMUST00000189957 | 699 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm3952-201 | ENSMUST00000195093 | 573 nt | APPRIS P1 TSL 5 BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm44099-201 | ENSMUST00000203299 | 112 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm44419-201 | ENSMUST00000203338 | 229 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm44784-201 | ENSMUST00000207396 | 460 nt | TSL 5 BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm44655-201 | ENSMUST00000207768 | 423 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm45826-201 | ENSMUST00000212226 | 265 nt | APPRIS P1 TSL 1 (best) BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm17829-201 | ENSMUST00000219782 | 344 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm10226-201 | ENSMUST00000072133 | 255 nt | APPRIS P1 BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm4987-201 | ENSMUST00000078326 | 408 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm23629-201 | ENSMUST00000082465 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm23924-201 | ENSMUST00000082474 | 108 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm22246-201 | ENSMUST00000082478 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm22749-201 | ENSMUST00000082490 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm22747-201 | ENSMUST00000082495 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm23296-201 | ENSMUST00000082555 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm22063-201 | ENSMUST00000082560 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm26129-201 | ENSMUST00000082719 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm24859-201 | ENSMUST00000082729 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm23057-201 | ENSMUST00000082801 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm26328-201 | ENSMUST00000082821 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm26331-201 | ENSMUST00000082824 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm24205-201 | ENSMUST00000082953 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm25405-201 | ENSMUST00000082973 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm22628-201 | ENSMUST00000082988 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm26324-201 | ENSMUST00000083073 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm24535-201 | ENSMUST00000083140 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm26496-201 | ENSMUST00000083150 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm25141-201 | ENSMUST00000083177 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm26127-201 | ENSMUST00000083193 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm24456-201 | ENSMUST00000083198 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm24458-201 | ENSMUST00000083204 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm24018-201 | ENSMUST00000083232 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm25794-201 | ENSMUST00000083286 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm25790-201 | ENSMUST00000083293 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm22295-201 | ENSMUST00000083311 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm25127-201 | ENSMUST00000083336 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm25583-201 | ENSMUST00000083413 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm25577-201 | ENSMUST00000083414 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm24414-201 | ENSMUST00000083434 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm24861-201 | ENSMUST00000083459 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm24803-201 | ENSMUST00000083693 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm23103-201 | ENSMUST00000083725 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm22580-201 | ENSMUST00000083727 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm24260-201 | ENSMUST00000083741 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm23732-201 | ENSMUST00000083751 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm22682-201 | ENSMUST00000083854 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm25869-201 | ENSMUST00000083855 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm24693-201 | ENSMUST00000083885 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm26317-201 | ENSMUST00000083894 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm22352-201 | ENSMUST00000083917 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm24448-201 | ENSMUST00000083979 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm22798-201 | ENSMUST00000083992 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm26427-201 | ENSMUST00000093648 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm22886-201 | ENSMUST00000093714 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm22170-201 | ENSMUST00000097247 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | AC152162.1-201 | ENSMUST00000225910 | 2917 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Olfr1016-202 | ENSMUST00000216425 | 2698 nt | APPRIS P1 TSL 3 BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Olfr1033-204 | ENSMUST00000215682 | 3625 nt | APPRIS P1 TSL 1 (best) BASIC | 3.31 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | AC126033.1-201 | ENSMUST00000227628 | 6773 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Neb-203 | ENSMUST00000075301 | 21456 nt | APPRIS ALT2 TSL 5 BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Vmn2r32-201 | ENSMUST00000094866 | 3513 nt | APPRIS P1 TSL 5 BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | mt-Nd4-201 | ENSMUST00000082414 | 1378 nt | APPRIS P1 BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm26387-201 | ENSMUST00000104238 | 132 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm26418-201 | ENSMUST00000104275 | 137 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Vmn1r-ps125-201 | ENSMUST00000117767 | 290 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm13478-201 | ENSMUST00000118312 | 413 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm13687-201 | ENSMUST00000119857 | 282 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm13903-201 | ENSMUST00000120945 | 193 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm11931-201 | ENSMUST00000121630 | 447 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm11403-201 | ENSMUST00000122195 | 369 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm11958-201 | ENSMUST00000127224 | 253 nt | TSL 5 BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm13096-201 | ENSMUST00000127752 | 251 nt | TSL 5 BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm15718-201 | ENSMUST00000131085 | 311 nt | TSL 3 BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm13266-201 | ENSMUST00000141869 | 579 nt | TSL 2 BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm26102-201 | ENSMUST00000157251 | 284 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm22501-201 | ENSMUST00000158981 | 127 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm21776-201 | ENSMUST00000177676 | 1083 nt | APPRIS P1 BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm23977-201 | ENSMUST00000177871 | 74 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Ighv6-5-201 | ENSMUST00000179796 | 297 nt | APPRIS P1 BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm21913-201 | ENSMUST00000179880 | 1083 nt | APPRIS P1 BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Mir6338-201 | ENSMUST00000183389 | 109 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Ranbp2-ps7-201 | ENSMUST00000183924 | 384 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Ranbp2-ps9-201 | ENSMUST00000184566 | 382 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm29429-201 | ENSMUST00000187071 | 121 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm28784-201 | ENSMUST00000187817 | 1011 nt | TSL 1 (best) BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm29183-201 | ENSMUST00000188600 | 790 nt | TSL 5 BASIC | 3.3 | □□□□□ -1.88 | | |
| Hoxa3 | P02831 | Gm28500-201 | ENSMUST00000190286 | 151 nt | BASIC | 3.3 | □□□□□ -1.88 | | |