Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.6□□□□□ -2.15
Hmgb3O54879 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.6□□□□□ -2.15
Hmgb3O54879 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC1.6□□□□□ -2.15
Hmgb3O54879 Gm44708-201ENSMUST00000205580 2237 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC1.59□□□□□ -2.15
Hmgb3O54879 Gm15381-201ENSMUST00000121501 1156 ntBASIC1.59□□□□□ -2.15
Hmgb3O54879 Gm12412-201ENSMUST00000121867 328 ntBASIC1.59□□□□□ -2.15
Hmgb3O54879 Gm16355-201ENSMUST00000128606 231 ntBASIC1.59□□□□□ -2.15
Hmgb3O54879 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.59□□□□□ -2.15
Hmgb3O54879 Gm16354-201ENSMUST00000155376 150 ntBASIC1.59□□□□□ -2.15
Hmgb3O54879 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC1.59□□□□□ -2.15
Hmgb3O54879 Gm23473-201ENSMUST00000158883 116 ntBASIC1.59□□□□□ -2.15
Hmgb3O54879 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Hmgb3O54879 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Hmgb3O54879 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Hmgb3O54879 Gm29263-201ENSMUST00000188718 463 ntBASIC1.59□□□□□ -2.15
Hmgb3O54879 Gm28384-201ENSMUST00000189079 463 ntBASIC1.59□□□□□ -2.15
Hmgb3O54879 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Hmgb3O54879 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC1.59□□□□□ -2.15
Hmgb3O54879 Gm43582-201ENSMUST00000196149 343 ntBASIC1.59□□□□□ -2.15
Hmgb3O54879 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.59□□□□□ -2.15
Hmgb3O54879 Gm17893-201ENSMUST00000203017 770 ntBASIC1.59□□□□□ -2.15
Hmgb3O54879 Gm44634-201ENSMUST00000206119 152 ntBASIC1.59□□□□□ -2.15
Hmgb3O54879 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.59□□□□□ -2.15
Hmgb3O54879 CT571268.1-201ENSMUST00000222320 407 ntBASIC1.59□□□□□ -2.15
Hmgb3O54879 AC151902.1-201ENSMUST00000227800 375 ntBASIC1.59□□□□□ -2.15
Hmgb3O54879 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.15
Hmgb3O54879 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Hmgb3O54879 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Hmgb3O54879 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Mir344c-201ENSMUST00000103919 92 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm23803-201ENSMUST00000104610 132 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm15176-201ENSMUST00000117734 135 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm14731-201ENSMUST00000119216 376 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm23889-201ENSMUST00000122689 104 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm25808-201ENSMUST00000122784 284 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm24691-201ENSMUST00000157762 140 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm22386-201ENSMUST00000158192 129 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Mir5129-201ENSMUST00000174938 78 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.58□□□□□ -2.16
Hmgb3O54879 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Hmgb3O54879 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm27544-201ENSMUST00000185069 155 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm28163-201ENSMUST00000187099 325 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm18964-201ENSMUST00000193013 563 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC1.58□□□□□ -2.16
Hmgb3O54879 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm19885-201ENSMUST00000212853 343 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm24151-201ENSMUST00000082758 141 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.58□□□□□ -2.16
Hmgb3O54879 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Hmgb3O54879 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.57□□□□□ -2.16
Hmgb3O54879 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Hmgb3O54879 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Hmgb3O54879 Gm11490-201ENSMUST00000118128 272 ntBASIC1.57□□□□□ -2.16
Hmgb3O54879 Gm14815-201ENSMUST00000120060 488 ntBASIC1.57□□□□□ -2.16
Hmgb3O54879 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Hmgb3O54879 Gm14840-201ENSMUST00000122135 594 ntBASIC1.57□□□□□ -2.16
Hmgb3O54879 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Hmgb3O54879 Gm23718-201ENSMUST00000157350 307 ntBASIC1.57□□□□□ -2.16
Hmgb3O54879 Gm24010-201ENSMUST00000157731 282 ntBASIC1.57□□□□□ -2.16
Hmgb3O54879 Gm17072-201ENSMUST00000166673 658 ntBASIC1.57□□□□□ -2.16
Hmgb3O54879 Gm24572-201ENSMUST00000175505 88 ntBASIC1.57□□□□□ -2.16
Hmgb3O54879 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC1.57□□□□□ -2.16
Hmgb3O54879 Gm28637-201ENSMUST00000179424 345 ntBASIC1.57□□□□□ -2.16
Hmgb3O54879 Gm20058-201ENSMUST00000186939 284 ntBASIC1.57□□□□□ -2.16
Hmgb3O54879 Gm28745-201ENSMUST00000190069 305 ntBASIC1.57□□□□□ -2.16
Hmgb3O54879 Gm44794-201ENSMUST00000206550 411 ntBASIC1.57□□□□□ -2.16
Hmgb3O54879 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
Hmgb3O54879 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC1.57□□□□□ -2.16
Hmgb3O54879 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC1.57□□□□□ -2.16
Hmgb3O54879 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Hmgb3O54879 Gm26206-201ENSMUST00000082908 110 ntBASIC1.57□□□□□ -2.16
Hmgb3O54879 Gm10343-201ENSMUST00000096279 348 ntBASIC1.57□□□□□ -2.16
Hmgb3O54879 Gm24098-201ENSMUST00000102075 109 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm25381-201ENSMUST00000102078 109 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm24984-201ENSMUST00000104454 133 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm24907-201ENSMUST00000116932 128 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm14918-201ENSMUST00000118153 268 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm14881-201ENSMUST00000120366 372 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm23137-201ENSMUST00000157559 107 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm37353-201ENSMUST00000194497 313 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm7871-201ENSMUST00000195346 618 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm44393-201ENSMUST00000197418 138 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 Mir6925-201ENSMUST00000197857 70 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm43708-201ENSMUST00000198857 961 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.56□□□□□ -2.16
Hmgb3O54879 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm20304-201ENSMUST00000218168 444 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms