Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Gm8080-201ENSMUST00000122046 1155 ntBASIC1.85□□□□□ -2.11
Ccr6O54689 Gm26027-201ENSMUST00000122725 268 ntBASIC1.85□□□□□ -2.11
Ccr6O54689 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ccr6O54689 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC1.85□□□□□ -2.11
Ccr6O54689 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ccr6O54689 Gm14651-201ENSMUST00000147192 442 ntBASIC1.85□□□□□ -2.11
Ccr6O54689 Gm25339-201ENSMUST00000157458 232 ntBASIC1.85□□□□□ -2.11
Ccr6O54689 Gm25637-201ENSMUST00000157529 107 ntBASIC1.85□□□□□ -2.11
Ccr6O54689 Gm23559-201ENSMUST00000157824 103 ntBASIC1.85□□□□□ -2.11
Ccr6O54689 Gm25460-201ENSMUST00000157954 127 ntBASIC1.85□□□□□ -2.11
Ccr6O54689 Gm22093-201ENSMUST00000158980 111 ntBASIC1.85□□□□□ -2.11
Ccr6O54689 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC1.85□□□□□ -2.11
Ccr6O54689 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Ccr6O54689 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.85□□□□□ -2.11
Ccr6O54689 Gm37104-201ENSMUST00000193278 196 ntBASIC1.85□□□□□ -2.11
Ccr6O54689 Gm43355-201ENSMUST00000196541 346 ntBASIC1.85□□□□□ -2.11
Ccr6O54689 Gm43901-201ENSMUST00000203247 453 ntBASIC1.85□□□□□ -2.11
Ccr6O54689 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC1.85□□□□□ -2.11
Ccr6O54689 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC1.85□□□□□ -2.11
Ccr6O54689 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.85□□□□□ -2.11
Ccr6O54689 Gm30534-201ENSMUST00000217928 207 ntBASIC1.85□□□□□ -2.11
Ccr6O54689 Mir208a-201ENSMUST00000083498 83 ntBASIC1.85□□□□□ -2.11
Ccr6O54689 Gm25007-201ENSMUST00000083808 133 ntBASIC1.85□□□□□ -2.11
Ccr6O54689 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ccr6O54689 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ccr6O54689 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Ccr6O54689 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ccr6O54689 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ccr6O54689 Gm25213-201ENSMUST00000102388 113 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccr6O54689 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccr6O54689 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm14918-201ENSMUST00000118153 268 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm6923-201ENSMUST00000118343 406 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm12935-201ENSMUST00000119352 246 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm12607-201ENSMUST00000120724 493 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm13443-201ENSMUST00000120770 555 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm13555-201ENSMUST00000121668 319 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC1.84□□□□□ -2.11
Ccr6O54689 Gm23324-201ENSMUST00000157421 131 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm26215-201ENSMUST00000158584 139 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm25490-201ENSMUST00000158734 130 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm26005-201ENSMUST00000158802 134 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm24086-201ENSMUST00000175171 98 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Mir3066-201ENSMUST00000175296 83 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm5709-201ENSMUST00000177879 1165 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Ccr6O54689 Gm38268-201ENSMUST00000195813 193 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.84□□□□□ -2.11
Ccr6O54689 Gm19649-201ENSMUST00000201126 822 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm44966-201ENSMUST00000208096 157 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm45791-201ENSMUST00000212908 352 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm3442-201ENSMUST00000216808 710 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Gm19118-201ENSMUST00000222554 98 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 CT030704.1-201ENSMUST00000227521 699 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 AC117202.3-201ENSMUST00000228532 310 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ccr6O54689 n-R5s176-201ENSMUST00000082683 109 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.84□□□□□ -2.11
Ccr6O54689 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Ccr6O54689 AC115891.1-201ENSMUST00000215798 1755 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ccr6O54689 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ccr6O54689 Mir682-201ENSMUST00000102281 96 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Mir883a-201ENSMUST00000104824 76 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm14931-201ENSMUST00000111079 253 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ccr6O54689 Gm14894-201ENSMUST00000117170 270 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm14973-201ENSMUST00000117248 255 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm5287-201ENSMUST00000120666 598 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Ccr6O54689 Gm26275-201ENSMUST00000157101 268 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm23819-201ENSMUST00000158744 109 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ccr6O54689 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ccr6O54689 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC1.83□□□□□ -2.12
Ccr6O54689 Gm22367-201ENSMUST00000178930 132 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm27676-201ENSMUST00000183669 61 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm27379-201ENSMUST00000183730 123 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Mir8106-201ENSMUST00000184520 139 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm28399-201ENSMUST00000186221 318 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm28572-201ENSMUST00000187444 318 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm37578-201ENSMUST00000192256 1177 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm37449-201ENSMUST00000193016 270 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm18658-201ENSMUST00000195558 270 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm37119-201ENSMUST00000195691 389 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm43284-201ENSMUST00000200103 253 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm44295-201ENSMUST00000203805 437 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm44526-201ENSMUST00000204664 121 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.83□□□□□ -2.12
Ccr6O54689 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Ccr6O54689 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ccr6O54689 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ccr6O54689 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ccr6O54689 Gm10025-201ENSMUST00000079568 372 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 n-R5s40-201ENSMUST00000082475 124 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.83□□□□□ -2.12
Ccr6O54689 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms