Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.78□□□□□ -2.12
Sdc4O35988 Gm29657-201ENSMUST00000189807 342 ntBASIC1.78□□□□□ -2.12
Sdc4O35988 Gm37455-201ENSMUST00000191993 529 ntBASIC1.78□□□□□ -2.12
Sdc4O35988 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.78□□□□□ -2.12
Sdc4O35988 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Sdc4O35988 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Sdc4O35988 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
Sdc4O35988 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Sdc4O35988 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.77□□□□□ -2.13
Sdc4O35988 Gm22761-201ENSMUST00000102278 96 ntBASIC1.77□□□□□ -2.13
Sdc4O35988 Gm25938-201ENSMUST00000104139 166 ntBASIC1.77□□□□□ -2.13
Sdc4O35988 Gm25377-201ENSMUST00000104334 129 ntBASIC1.77□□□□□ -2.13
Sdc4O35988 Gm14020-201ENSMUST00000118165 662 ntBASIC1.77□□□□□ -2.13
Sdc4O35988 Gm16289-201ENSMUST00000162079 183 ntBASIC1.77□□□□□ -2.13
Sdc4O35988 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Sdc4O35988 Gm3102-201ENSMUST00000164236 489 ntBASIC1.77□□□□□ -2.13
Sdc4O35988 Mir6379-201ENSMUST00000183392 115 ntBASIC1.77□□□□□ -2.13
Sdc4O35988 Gm37692-201ENSMUST00000192633 232 ntBASIC1.77□□□□□ -2.13
Sdc4O35988 Gm29740-201ENSMUST00000193182 655 ntBASIC1.77□□□□□ -2.13
Sdc4O35988 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Sdc4O35988 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.77□□□□□ -2.13
Sdc4O35988 AC131743.3-201ENSMUST00000222099 662 ntBASIC1.77□□□□□ -2.13
Sdc4O35988 AC113031.2-201ENSMUST00000226132 579 ntBASIC1.77□□□□□ -2.13
Sdc4O35988 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Sdc4O35988 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.77□□□□□ -2.13
Sdc4O35988 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Sdc4O35988 Gm5583-201ENSMUST00000174328 1519 ntBASIC1.76□□□□□ -2.13
Sdc4O35988 Gm4855-201ENSMUST00000192270 1967 ntBASIC1.76□□□□□ -2.13
Sdc4O35988 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Sdc4O35988 Mir301b-201ENSMUST00000102333 97 ntBASIC1.76□□□□□ -2.13
Sdc4O35988 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.76□□□□□ -2.13
Sdc4O35988 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC1.76□□□□□ -2.13
Sdc4O35988 Gm22316-201ENSMUST00000158012 216 ntBASIC1.76□□□□□ -2.13
Sdc4O35988 Gm24638-201ENSMUST00000179807 132 ntBASIC1.76□□□□□ -2.13
Sdc4O35988 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.76□□□□□ -2.13
Sdc4O35988 Gm37162-201ENSMUST00000191708 551 ntBASIC1.76□□□□□ -2.13
Sdc4O35988 Gm38238-201ENSMUST00000194334 346 ntBASIC1.76□□□□□ -2.13
Sdc4O35988 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.76□□□□□ -2.13
Sdc4O35988 Gm45049-201ENSMUST00000207586 591 ntBASIC1.76□□□□□ -2.13
Sdc4O35988 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.76□□□□□ -2.13
Sdc4O35988 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.76□□□□□ -2.13
Sdc4O35988 AC134254.4-201ENSMUST00000223086 370 ntBASIC1.76□□□□□ -2.13
Sdc4O35988 AC165284.1-201ENSMUST00000228614 458 ntBASIC1.76□□□□□ -2.13
Sdc4O35988 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Sdc4O35988 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Sdc4O35988 Mir148b-201ENSMUST00000083626 97 ntBASIC1.76□□□□□ -2.13
Sdc4O35988 Gm21286-201ENSMUST00000098035 545 ntBASIC1.76□□□□□ -2.13
Sdc4O35988 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Sdc4O35988 Gm11898-201ENSMUST00000117161 385 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Mup-ps12-201ENSMUST00000126217 549 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm25113-201ENSMUST00000157185 143 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm24783-201ENSMUST00000157639 100 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm25332-201ENSMUST00000158038 105 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm24076-201ENSMUST00000158179 94 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm24875-201ENSMUST00000158888 104 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm8161-201ENSMUST00000168739 481 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Sdc4O35988 Gm17186-201ENSMUST00000171742 456 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm23415-201ENSMUST00000175519 83 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm22252-201ENSMUST00000179316 79 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Mir6995-201ENSMUST00000183658 71 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm27898-201ENSMUST00000183987 80 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm37979-201ENSMUST00000193065 712 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm37054-201ENSMUST00000193481 543 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm43096-201ENSMUST00000196173 421 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm44665-201ENSMUST00000205381 251 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm45146-201ENSMUST00000207108 221 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm45023-201ENSMUST00000207951 379 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC1.75□□□□□ -2.13
Sdc4O35988 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC1.75□□□□□ -2.13
Sdc4O35988 AC160970.1-201ENSMUST00000219311 475 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 AC137902.2-201ENSMUST00000227989 576 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Sdc4O35988 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Sdc4O35988 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Sdc4O35988 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
Sdc4O35988 Gm23975-201ENSMUST00000082685 106 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC1.75□□□□□ -2.13
Sdc4O35988 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Sdc4O35988 AC164297.6-201ENSMUST00000224643 1568 ntBASIC1.74□□□□□ -2.13
Sdc4O35988 Gm22478-201ENSMUST00000122570 154 ntBASIC1.74□□□□□ -2.13
Sdc4O35988 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.74□□□□□ -2.13
Sdc4O35988 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC1.74□□□□□ -2.13
Sdc4O35988 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.74□□□□□ -2.13
Sdc4O35988 Gm19202-201ENSMUST00000198096 808 ntBASIC1.74□□□□□ -2.13
Sdc4O35988 Gm19118-201ENSMUST00000222554 98 ntBASIC1.74□□□□□ -2.13
Sdc4O35988 Gm27013-202ENSMUST00000205067 1436 ntBASIC1.74□□□□□ -2.13
Sdc4O35988 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.73□□□□□ -2.13
Sdc4O35988 Gm24984-201ENSMUST00000104454 133 ntBASIC1.73□□□□□ -2.13
Sdc4O35988 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Sdc4O35988 Gm15162-201ENSMUST00000119325 283 ntBASIC1.73□□□□□ -2.13
Sdc4O35988 Gm14748-201ENSMUST00000119819 411 ntBASIC1.73□□□□□ -2.13
Sdc4O35988 Gm11556-201ENSMUST00000120751 288 ntBASIC1.73□□□□□ -2.13
Sdc4O35988 Gm13406-201ENSMUST00000121991 256 ntBASIC1.73□□□□□ -2.13
Sdc4O35988 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC1.73□□□□□ -2.13
Sdc4O35988 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Sdc4O35988 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC1.73□□□□□ -2.13
Sdc4O35988 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC1.73□□□□□ -2.13
Sdc4O35988 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.73□□□□□ -2.13
Sdc4O35988 Mir6383-201ENSMUST00000184545 116 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms