Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm45365-201ENSMUST00000209489 256 ntBASIC2.18□□□□□ -2.06
Ccdc180J3QNE4 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.18□□□□□ -2.06
Ccdc180J3QNE4 Gm12294-201ENSMUST00000119723 490 ntBASIC2.18□□□□□ -2.06
Ccdc180J3QNE4 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.18□□□□□ -2.06
Ccdc180J3QNE4 Gm27733-201ENSMUST00000184803 68 ntBASIC2.18□□□□□ -2.06
Ccdc180J3QNE4 Gm37676-201ENSMUST00000195496 507 ntBASIC2.18□□□□□ -2.06
Ccdc180J3QNE4 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.18□□□□□ -2.06
Ccdc180J3QNE4 CT573422.1-201ENSMUST00000216655 405 ntBASIC2.18□□□□□ -2.06
Ccdc180J3QNE4 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.18□□□□□ -2.06
Ccdc180J3QNE4 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Ccdc180J3QNE4 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Ccdc180J3QNE4 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Ccdc180J3QNE4 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Ccdc180J3QNE4 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Ccdc180J3QNE4 Gm11350-201ENSMUST00000121436 870 ntBASIC2.17□□□□□ -2.06
Ccdc180J3QNE4 Gm24863-201ENSMUST00000179499 107 ntBASIC2.17□□□□□ -2.06
Ccdc180J3QNE4 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Ccdc180J3QNE4 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Ccdc180J3QNE4 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
Ccdc180J3QNE4 Gm14797-201ENSMUST00000119378 1480 ntBASIC2.16□□□□□ -2.06
Ccdc180J3QNE4 Gm13331-201ENSMUST00000117500 448 ntBASIC2.16□□□□□ -2.06
Ccdc180J3QNE4 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC2.16□□□□□ -2.06
Ccdc180J3QNE4 Gm24878-201ENSMUST00000158782 104 ntBASIC2.16□□□□□ -2.06
Ccdc180J3QNE4 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.16□□□□□ -2.06
Ccdc180J3QNE4 Gm37987-201ENSMUST00000194999 825 ntBASIC2.16□□□□□ -2.06
Ccdc180J3QNE4 Gm5322-201ENSMUST00000206142 699 ntBASIC2.16□□□□□ -2.06
Ccdc180J3QNE4 Gm25768-201ENSMUST00000158570 98 ntBASIC2.15□□□□□ -2.06
Ccdc180J3QNE4 Gm22929-201ENSMUST00000175517 107 ntBASIC2.15□□□□□ -2.06
Ccdc180J3QNE4 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Ccdc180J3QNE4 Gm22740-201ENSMUST00000083439 109 ntBASIC2.15□□□□□ -2.06
Ccdc180J3QNE4 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.15□□□□□ -2.06
Ccdc180J3QNE4 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Ccdc180J3QNE4 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
Ccdc180J3QNE4 Gm15443-201ENSMUST00000118947 820 ntBASIC2.15□□□□□ -2.07
Ccdc180J3QNE4 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC2.15□□□□□ -2.07
Ccdc180J3QNE4 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Ccdc180J3QNE4 AC121114.1-201ENSMUST00000228522 570 ntBASIC2.15□□□□□ -2.07
Ccdc180J3QNE4 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ccdc180J3QNE4 Gm24630-201ENSMUST00000122768 106 ntBASIC2.14□□□□□ -2.07
Ccdc180J3QNE4 Gm22136-201ENSMUST00000158751 268 ntBASIC2.14□□□□□ -2.07
Ccdc180J3QNE4 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Ccdc180J3QNE4 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.14□□□□□ -2.07
Ccdc180J3QNE4 Gm23140-201ENSMUST00000082487 107 ntBASIC2.14□□□□□ -2.07
Ccdc180J3QNE4 Gm23328-201ENSMUST00000157418 132 ntBASIC2.13□□□□□ -2.07
Ccdc180J3QNE4 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Ccdc180J3QNE4 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC2.13□□□□□ -2.07
Ccdc180J3QNE4 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Ccdc180J3QNE4 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.13□□□□□ -2.07
Ccdc180J3QNE4 Gm7164-201ENSMUST00000117503 450 ntBASIC2.12□□□□□ -2.07
Ccdc180J3QNE4 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Ccdc180J3QNE4 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Ccdc180J3QNE4 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Ccdc180J3QNE4 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.12□□□□□ -2.07
Ccdc180J3QNE4 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.12□□□□□ -2.07
Ccdc180J3QNE4 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC2.12□□□□□ -2.07
Ccdc180J3QNE4 AC168062.2-201ENSMUST00000228907 422 ntBASIC2.12□□□□□ -2.07
Ccdc180J3QNE4 Gm22980-201ENSMUST00000082608 70 ntBASIC2.12□□□□□ -2.07
Ccdc180J3QNE4 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Ccdc180J3QNE4 Gm11433-201ENSMUST00000118318 228 ntBASIC2.12□□□□□ -2.07
Ccdc180J3QNE4 Gm28169-201ENSMUST00000190342 345 ntBASIC2.12□□□□□ -2.07
Ccdc180J3QNE4 Gm26493-201ENSMUST00000083155 136 ntBASIC2.12□□□□□ -2.07
Ccdc180J3QNE4 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.12□□□□□ -2.07
Ccdc180J3QNE4 Gm45577-201ENSMUST00000210206 2287 ntBASIC2.11□□□□□ -2.07
Ccdc180J3QNE4 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.11□□□□□ -2.07
Ccdc180J3QNE4 Gm11854-201ENSMUST00000117839 446 ntBASIC2.11□□□□□ -2.07
Ccdc180J3QNE4 Gm11352-201ENSMUST00000119264 517 ntBASIC2.11□□□□□ -2.07
Ccdc180J3QNE4 AC079644.1-201ENSMUST00000220586 405 ntBASIC2.11□□□□□ -2.07
Ccdc180J3QNE4 Mir22-201ENSMUST00000083595 95 ntBASIC2.11□□□□□ -2.07
Ccdc180J3QNE4 Gm14905-201ENSMUST00000122351 639 ntBASIC2.1□□□□□ -2.07
Ccdc180J3QNE4 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.1□□□□□ -2.07
Ccdc180J3QNE4 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC2.1□□□□□ -2.07
Ccdc180J3QNE4 Gm17162-201ENSMUST00000168538 473 ntBASIC2.1□□□□□ -2.07
Ccdc180J3QNE4 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC2.1□□□□□ -2.07
Ccdc180J3QNE4 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC2.1□□□□□ -2.07
Ccdc180J3QNE4 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Ccdc180J3QNE4 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.1□□□□□ -2.07
Ccdc180J3QNE4 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.1□□□□□ -2.07
Ccdc180J3QNE4 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Ccdc180J3QNE4 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Ccdc180J3QNE4 Gm2005-201ENSMUST00000120759 542 ntBASIC2.09□□□□□ -2.07
Ccdc180J3QNE4 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Ccdc180J3QNE4 Gm42454-201ENSMUST00000196805 1181 ntBASIC2.09□□□□□ -2.07
Ccdc180J3QNE4 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.09□□□□□ -2.07
Ccdc180J3QNE4 Gm18991-201ENSMUST00000209225 746 ntBASIC2.09□□□□□ -2.07
Ccdc180J3QNE4 Gm24151-201ENSMUST00000082758 141 ntBASIC2.09□□□□□ -2.07
Ccdc180J3QNE4 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.09□□□□□ -2.08
Ccdc180J3QNE4 Gm25321-201ENSMUST00000122558 102 ntBASIC2.09□□□□□ -2.08
Ccdc180J3QNE4 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC2.09□□□□□ -2.08
Ccdc180J3QNE4 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
Ccdc180J3QNE4 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.09□□□□□ -2.08
Ccdc180J3QNE4 Gm7407-201ENSMUST00000208301 568 ntBASIC2.09□□□□□ -2.08
Ccdc180J3QNE4 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC2.09□□□□□ -2.08
Ccdc180J3QNE4 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Ccdc180J3QNE4 Gm22565-201ENSMUST00000175540 69 ntBASIC2.08□□□□□ -2.08
Ccdc180J3QNE4 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Ccdc180J3QNE4 Gm25715-201ENSMUST00000158627 125 ntBASIC2.07□□□□□ -2.08
Ccdc180J3QNE4 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Ccdc180J3QNE4 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.07□□□□□ -2.08
Ccdc180J3QNE4 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Ccdc180J3QNE4 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms