Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm23034-201ENSMUST00000158001 147 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm22765-201ENSMUST00000158371 128 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm25977-201ENSMUST00000158697 85 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm17064-201ENSMUST00000167690 452 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm19224-201ENSMUST00000190477 793 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm38268-201ENSMUST00000195813 193 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm43402-201ENSMUST00000197159 159 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm43669-201ENSMUST00000198229 436 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm44324-201ENSMUST00000198517 135 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm44125-201ENSMUST00000203068 448 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm44954-201ENSMUST00000208513 227 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm46994-201ENSMUST00000221523 219 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm5955-201ENSMUST00000222712 219 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 AC127578.1-201ENSMUST00000227289 93 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm7984-201ENSMUST00000060640 538 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm6369-201ENSMUST00000069626 412 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm22061-201ENSMUST00000082557 107 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm37236-201ENSMUST00000193670 3249 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm20172-201ENSMUST00000193138 1551 ntBASIC1.81□□□□□ -2.12
Trav11A0A0B4J1J9 Gm14868-201ENSMUST00000117840 216 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm11460-201ENSMUST00000118200 361 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm12096-201ENSMUST00000121149 829 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm26256-201ENSMUST00000122499 186 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm24908-201ENSMUST00000157294 127 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm23538-201ENSMUST00000157535 101 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm26041-201ENSMUST00000158148 108 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Mir5101-201ENSMUST00000175181 83 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm25194-201ENSMUST00000177987 79 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm27753-201ENSMUST00000184742 203 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm28666-201ENSMUST00000186649 274 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm28951-201ENSMUST00000190742 313 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm38044-201ENSMUST00000192964 487 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm32033-201ENSMUST00000193483 339 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm37319-201ENSMUST00000193500 636 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm43286-201ENSMUST00000197420 424 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm43405-201ENSMUST00000198642 337 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Igkv11-114-201ENSMUST00000200013 346 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 AC155923.1-201ENSMUST00000215676 356 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 CT025538.3-201ENSMUST00000225279 3848 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 AC117814.1-201ENSMUST00000226135 352 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 AC183096.1-201ENSMUST00000226392 130 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Gm13136-201ENSMUST00000121031 2950 ntBASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
Trav11A0A0B4J1J9 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 AC125532.1-201ENSMUST00000216210 2334 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm23911-201ENSMUST00000104596 134 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm13504-201ENSMUST00000117490 316 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm5646-201ENSMUST00000120568 714 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm15061-201ENSMUST00000121076 1046 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm14629-201ENSMUST00000122428 144 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm25220-201ENSMUST00000157546 95 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm26411-201ENSMUST00000157668 107 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 AC154297.1-201ENSMUST00000171334 397 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm17166-201ENSMUST00000172006 431 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Mir6975-201ENSMUST00000184879 61 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm19193-201ENSMUST00000190263 590 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm43171-201ENSMUST00000199882 291 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm45513-201ENSMUST00000210228 376 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 AC150560.3-201ENSMUST00000227442 455 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Olfr815-201ENSMUST00000071557 951 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Mir350-201ENSMUST00000083639 99 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm22154-201ENSMUST00000083844 131 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm22866-201ENSMUST00000083947 177 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms