Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Gm44212-201ENSMUST00000205016 897 ntBASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 Gm45232-201ENSMUST00000207811 162 ntBASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 AC138284.5-201ENSMUST00000214389 652 ntBASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 AC166574.3-201ENSMUST00000226725 367 ntBASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 Gm22810-201ENSMUST00000082741 158 ntBASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 Gm25404-201ENSMUST00000082970 107 ntBASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 Gm24533-201ENSMUST00000083138 196 ntBASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 Gm23503-201ENSMUST00000083903 107 ntBASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 Gm9218-201ENSMUST00000121068 2694 ntBASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trav12-3A0A075B648 Gm42482-201ENSMUST00000198904 1947 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm24280-201ENSMUST00000104237 134 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm24376-201ENSMUST00000104399 127 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm15846-201ENSMUST00000116022 320 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm12102-201ENSMUST00000118251 604 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Defa-ps9-201ENSMUST00000118264 276 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm12096-201ENSMUST00000121149 829 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm24517-201ENSMUST00000122560 107 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm23867-201ENSMUST00000122649 274 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm23206-201ENSMUST00000122720 184 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm26020-201ENSMUST00000122729 183 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm24910-201ENSMUST00000157289 272 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm22816-201ENSMUST00000157450 117 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm25519-201ENSMUST00000158392 127 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm8580-201ENSMUST00000160295 464 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm6264-202ENSMUST00000162896 1217 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm23619-201ENSMUST00000178411 94 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm25474-201ENSMUST00000179052 94 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm22047-201ENSMUST00000179176 94 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm24464-201ENSMUST00000179697 107 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm24306-201ENSMUST00000180229 79 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 S100a11-ps-201ENSMUST00000181735 306 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm38146-201ENSMUST00000194121 1293 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm44472-201ENSMUST00000204922 943 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm40598-201ENSMUST00000222953 547 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 AC167192.4-201ENSMUST00000224087 993 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 AC174797.3-202ENSMUST00000224578 587 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm25257-201ENSMUST00000083907 110 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Mir463-201ENSMUST00000093570 75 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Gm10400-201ENSMUST00000203920 3835 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 AC152979.2-201ENSMUST00000219702 3814 ntBASIC1.89□□□□□ -2.11
Trav12-3A0A075B648 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm22936-201ENSMUST00000103955 126 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm22269-201ENSMUST00000104002 130 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm15029-201ENSMUST00000119742 199 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm6762-201ENSMUST00000121769 289 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm24911-201ENSMUST00000157292 136 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm23228-201ENSMUST00000157296 270 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm22187-201ENSMUST00000157819 129 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm25706-201ENSMUST00000157828 247 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm24813-201ENSMUST00000175310 84 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm22290-201ENSMUST00000177655 107 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm22583-201ENSMUST00000178031 107 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm23269-201ENSMUST00000178701 107 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm25361-201ENSMUST00000179358 76 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm38280-201ENSMUST00000192610 158 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm37757-201ENSMUST00000193072 210 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm42647-201ENSMUST00000195939 459 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Igkv12-66-201ENSMUST00000199305 348 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm18100-201ENSMUST00000200897 452 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm44449-201ENSMUST00000203610 153 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm44795-201ENSMUST00000205496 319 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 AC167721.1-201ENSMUST00000217088 279 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 AC159297.2-201ENSMUST00000219567 1075 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 AC132881.2-201ENSMUST00000225474 709 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 AC118639.1-204ENSMUST00000226401 694 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm24147-201ENSMUST00000082763 144 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm26494-201ENSMUST00000083154 143 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm24490-201ENSMUST00000083803 98 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Gm24493-201ENSMUST00000083805 143 ntBASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trav12-3A0A075B648 AC153967.1-201ENSMUST00000219333 3190 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms