Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm22229-201ENSMUST00000082987 108 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm24268-201ENSMUST00000082990 110 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm26055-201ENSMUST00000083038 107 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm23264-201ENSMUST00000083372 107 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm24376-201ENSMUST00000104399 127 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm14868-201ENSMUST00000117840 216 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm15443-201ENSMUST00000118947 820 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm11359-201ENSMUST00000120039 567 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm23124-201ENSMUST00000157650 107 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm22516-201ENSMUST00000158266 124 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm26005-201ENSMUST00000158802 134 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm17166-201ENSMUST00000172006 431 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm26194-201ENSMUST00000175036 71 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm23152-201ENSMUST00000175322 116 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Mir669a-7-201ENSMUST00000180364 87 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm8816-201ENSMUST00000182280 1163 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Mir7242-201ENSMUST00000183710 79 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm8392-201ENSMUST00000185647 835 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm28151-201ENSMUST00000189404 951 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm19193-201ENSMUST00000190263 590 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm37771-201ENSMUST00000193121 265 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Mir669a-6-201ENSMUST00000196127 87 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm19089-201ENSMUST00000197207 613 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm42622-201ENSMUST00000197229 355 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Mir669a-12-201ENSMUST00000197274 87 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Mir669a-5-201ENSMUST00000197439 87 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Mir669a-10-201ENSMUST00000197745 87 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Mir669a-11-201ENSMUST00000197952 87 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Mir669a-4-201ENSMUST00000198665 87 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Mir669a-9-201ENSMUST00000200087 87 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Mir669a-8-201ENSMUST00000200268 87 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm29848-201ENSMUST00000203107 295 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.56□□□□□ -2
Trav1A0A075B5Z4 AC116589.1-201ENSMUST00000220634 327 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm22572-201ENSMUST00000082985 105 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm29730-201ENSMUST00000192986 1396 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Gm37983-201ENSMUST00000193207 2006 ntBASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav1A0A075B5Z4 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Gm14657-201ENSMUST00000117461 302 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Gm12492-201ENSMUST00000117665 564 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Gm12878-201ENSMUST00000118744 332 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Gm12042-201ENSMUST00000120479 301 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Gm22199-201ENSMUST00000122660 126 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Gm16533-201ENSMUST00000140035 228 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Gm24784-201ENSMUST00000157640 62 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Gm27845-201ENSMUST00000184479 114 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Gm8125-201ENSMUST00000216602 738 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Gm46193-201ENSMUST00000219399 364 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 AC116557.1-201ENSMUST00000219494 1521 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Gm19441-201ENSMUST00000221545 330 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Gm35558-203ENSMUST00000222264 204 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trav1A0A075B5Z4 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm11285-201ENSMUST00000118443 322 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm14049-201ENSMUST00000121009 636 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms