Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm14562-201ENSMUST00000129885 543 ntBASIC2.71□□□□□ -1.98
H2afb2S4R1M3 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Gm25280-201ENSMUST00000157269 101 ntBASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Gm26088-201ENSMUST00000157896 131 ntBASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Gm24498-201ENSMUST00000158445 102 ntBASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Gm17187-201ENSMUST00000164622 410 ntBASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Gm22858-201ENSMUST00000174972 76 ntBASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Gm27477-201ENSMUST00000184649 143 ntBASIC2.71□□□□□ -1.98
H2afb2S4R1M3 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Gm18296-201ENSMUST00000192475 783 ntBASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Gm37692-201ENSMUST00000192633 232 ntBASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Gm19457-201ENSMUST00000200995 448 ntBASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 CT025603.4-201ENSMUST00000225777 413 ntBASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
H2afb2S4R1M3 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm23577-201ENSMUST00000103950 110 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm25876-201ENSMUST00000104329 119 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm22497-201ENSMUST00000104499 131 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm25539-201ENSMUST00000116886 122 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm25509-201ENSMUST00000116985 106 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm11577-201ENSMUST00000118030 737 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm11693-201ENSMUST00000119625 565 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm14240-201ENSMUST00000120353 546 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm14366-201ENSMUST00000121970 730 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm22597-201ENSMUST00000157602 80 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm22555-201ENSMUST00000157801 62 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm23619-201ENSMUST00000178411 94 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm25474-201ENSMUST00000179052 94 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm22047-201ENSMUST00000179176 94 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm4076-201ENSMUST00000179230 965 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm28283-201ENSMUST00000185509 178 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm37417-201ENSMUST00000195257 454 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm19244-201ENSMUST00000204340 253 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.7□□□□□ -1.98
H2afb2S4R1M3 AC134334.1-201ENSMUST00000214277 255 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm30534-201ENSMUST00000217928 207 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm18113-201ENSMUST00000220630 303 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm7984-201ENSMUST00000060640 538 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.7□□□□□ -1.98
H2afb2S4R1M3 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Gm12787-201ENSMUST00000119234 396 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Gm25706-201ENSMUST00000157828 247 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Gm24534-201ENSMUST00000157949 291 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Gm24082-201ENSMUST00000175175 83 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Gm23268-201ENSMUST00000175494 78 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Mir669a-7-201ENSMUST00000180364 87 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Gm26652-202ENSMUST00000181672 475 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Gm27999-201ENSMUST00000183539 193 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Gm27919-201ENSMUST00000185163 107 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Gm29597-201ENSMUST00000188035 308 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Gm6651-201ENSMUST00000189471 271 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Gm29740-201ENSMUST00000193182 655 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Mir669a-6-201ENSMUST00000196127 87 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Mir669a-12-201ENSMUST00000197274 87 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Mir669a-5-201ENSMUST00000197439 87 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Mir669a-10-201ENSMUST00000197745 87 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Mir669a-11-201ENSMUST00000197952 87 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Mir669a-4-201ENSMUST00000198665 87 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Mir669a-9-201ENSMUST00000200087 87 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Mir669a-8-201ENSMUST00000200268 87 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Gm26206-201ENSMUST00000082908 110 ntBASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.69□□□□□ -1.98
H2afb2S4R1M3 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms