Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm23446-201ENSMUST00000177977 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm26201-201ENSMUST00000178047 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm24711-201ENSMUST00000178062 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm24609-201ENSMUST00000178166 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm23265-201ENSMUST00000178321 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm22812-201ENSMUST00000178329 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm26246-201ENSMUST00000178388 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm25155-201ENSMUST00000178450 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm24760-201ENSMUST00000178530 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm22285-201ENSMUST00000178576 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm22417-201ENSMUST00000178656 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm26270-201ENSMUST00000178690 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm23313-201ENSMUST00000178931 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm23089-201ENSMUST00000178947 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm24153-201ENSMUST00000179280 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm25597-201ENSMUST00000179388 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm25816-201ENSMUST00000179764 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm26188-201ENSMUST00000179963 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm26433-201ENSMUST00000180227 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm25873-201ENSMUST00000180317 107 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm22128-201ENSMUST00000180346 94 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Mir6353-201ENSMUST00000183596 113 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm28438-201ENSMUST00000188299 345 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm28647-201ENSMUST00000188416 197 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm8747-201ENSMUST00000195392 751 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm44041-201ENSMUST00000203678 396 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm45395-201ENSMUST00000209891 559 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm45452-201ENSMUST00000210905 177 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Gm46136-201ENSMUST00000214730 565 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Mir465-201ENSMUST00000093563 74 ntBASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Cldn9Q9Z0S7 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm26473-201ENSMUST00000116763 127 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm14594-201ENSMUST00000118052 537 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm14590-201ENSMUST00000118934 537 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm14841-201ENSMUST00000121067 758 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm14694-201ENSMUST00000121856 282 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm25945-201ENSMUST00000122484 135 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm25270-201ENSMUST00000122606 138 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm26195-201ENSMUST00000175035 101 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm14596-201ENSMUST00000180268 537 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm23648-201ENSMUST00000180301 107 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm14595-201ENSMUST00000180335 537 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm28688-201ENSMUST00000187301 268 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm28779-201ENSMUST00000189678 323 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm35570-201ENSMUST00000198730 681 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm4945-201ENSMUST00000075152 453 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm25131-201ENSMUST00000082653 151 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm22622-201ENSMUST00000082870 129 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm23506-201ENSMUST00000083077 107 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.37□□□□□ -2.03
Cldn9Q9Z0S7 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cldn9Q9Z0S7 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cldn9Q9Z0S7 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.36□□□□□ -2.03
Cldn9Q9Z0S7 Mir344c-201ENSMUST00000103919 92 ntBASIC2.36□□□□□ -2.03
Cldn9Q9Z0S7 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.36□□□□□ -2.03
Cldn9Q9Z0S7 Gm14940-201ENSMUST00000119309 495 ntBASIC2.36□□□□□ -2.03
Cldn9Q9Z0S7 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.36□□□□□ -2.03
Cldn9Q9Z0S7 Gm23980-201ENSMUST00000157135 158 ntBASIC2.36□□□□□ -2.03
Cldn9Q9Z0S7 Gm23588-201ENSMUST00000157659 99 ntBASIC2.36□□□□□ -2.03
Cldn9Q9Z0S7 Gm22099-201ENSMUST00000157925 123 ntBASIC2.36□□□□□ -2.03
Cldn9Q9Z0S7 Gm23704-201ENSMUST00000158844 340 ntBASIC2.36□□□□□ -2.03
Cldn9Q9Z0S7 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Cldn9Q9Z0S7 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms