Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm26396-201ENSMUST00000104093 132 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Gm11367-201ENSMUST00000117802 120 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Gm13676-201ENSMUST00000122185 591 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Gm22957-201ENSMUST00000122511 123 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Gm25839-201ENSMUST00000158921 103 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Gm15508-201ENSMUST00000160330 325 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Gm37778-201ENSMUST00000191732 190 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Gm43675-201ENSMUST00000199468 1184 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Gm16400-201ENSMUST00000116523 1029 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Mup-ps14-201ENSMUST00000118437 532 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Gm14940-201ENSMUST00000119309 495 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Gm12383-201ENSMUST00000120628 760 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Mup-ps2-201ENSMUST00000142602 533 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Gm23714-201ENSMUST00000179259 105 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Gm6059-201ENSMUST00000196903 340 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Gm45049-201ENSMUST00000207586 591 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Gm46312-201ENSMUST00000220961 420 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Mir30d-201ENSMUST00000083503 82 ntBASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Scn8aQ9WTU3 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 Gm24984-201ENSMUST00000104454 133 ntBASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 Adgrg4-206ENSMUST00000168724 531 ntBASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 Mir6383-201ENSMUST00000184545 116 ntBASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 Gm28383-201ENSMUST00000187563 139 ntBASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 Gm29262-201ENSMUST00000190084 196 ntBASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 Gm43345-201ENSMUST00000199484 269 ntBASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 AC131743.3-201ENSMUST00000222099 662 ntBASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 AC154276.2-201ENSMUST00000227707 309 ntBASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 Gm44679-201ENSMUST00000207202 2908 ntBASIC1.71□□□□□ -2.14
Scn8aQ9WTU3 Gm7974-201ENSMUST00000117154 408 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Gm13046-201ENSMUST00000117391 501 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Gm24572-201ENSMUST00000175505 88 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Gm25412-201ENSMUST00000180258 107 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Mir7021-201ENSMUST00000197026 63 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Mir7217-201ENSMUST00000200304 62 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Gm44857-201ENSMUST00000208331 196 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Gm23096-201ENSMUST00000083447 107 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Gm26080-201ENSMUST00000104069 131 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Gm23792-201ENSMUST00000122557 93 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Gm24379-201ENSMUST00000122695 86 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Gm7897-201ENSMUST00000193981 554 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 AC122924.2-201ENSMUST00000220799 298 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.7□□□□□ -2.14
Scn8aQ9WTU3 Gm16373-201ENSMUST00000129517 303 ntBASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 Gm27999-201ENSMUST00000183539 193 ntBASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 Gm28794-201ENSMUST00000185276 136 ntBASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 Gm44308-201ENSMUST00000197080 99 ntBASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 Gm44727-201ENSMUST00000204225 451 ntBASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 AC133176.1-201ENSMUST00000226668 219 ntBASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 Gm25402-201ENSMUST00000082966 131 ntBASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 Gm23723-201ENSMUST00000082996 132 ntBASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 Gm14442-201ENSMUST00000119690 1736 ntBASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC1.69□□□□□ -2.14
Scn8aQ9WTU3 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Gm24907-201ENSMUST00000116932 128 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Gm17538-201ENSMUST00000168236 327 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Gm37054-201ENSMUST00000193481 543 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Gm18551-201ENSMUST00000195594 642 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Gm43765-201ENSMUST00000196303 893 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 AC154828.2-201ENSMUST00000220908 1070 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 113 ms