Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC1.79□□□□□ -2.12
Scn11aQ9R053 Gm44478-201ENSMUST00000204875 114 ntBASIC1.79□□□□□ -2.12
Scn11aQ9R053 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC1.79□□□□□ -2.12
Scn11aQ9R053 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.79□□□□□ -2.12
Scn11aQ9R053 Gm26063-201ENSMUST00000083378 107 ntBASIC1.79□□□□□ -2.12
Scn11aQ9R053 Gm25005-201ENSMUST00000083812 156 ntBASIC1.79□□□□□ -2.12
Scn11aQ9R053 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.79□□□□□ -2.12
Scn11aQ9R053 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC1.79□□□□□ -2.12
Scn11aQ9R053 Gm43047-201ENSMUST00000200089 3460 ntBASIC1.78□□□□□ -2.12
Scn11aQ9R053 Gm22780-201ENSMUST00000104084 132 ntBASIC1.78□□□□□ -2.12
Scn11aQ9R053 Gm23636-201ENSMUST00000175070 95 ntBASIC1.78□□□□□ -2.12
Scn11aQ9R053 Gm43723-201ENSMUST00000196886 189 ntBASIC1.78□□□□□ -2.12
Scn11aQ9R053 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.78□□□□□ -2.12
Scn11aQ9R053 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Scn11aQ9R053 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC1.78□□□□□ -2.12
Scn11aQ9R053 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Scn11aQ9R053 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Scn11aQ9R053 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
Scn11aQ9R053 Gm45577-201ENSMUST00000210206 2287 ntBASIC1.78□□□□□ -2.13
Scn11aQ9R053 Mir290a-201ENSMUST00000104627 83 ntBASIC1.77□□□□□ -2.13
Scn11aQ9R053 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Scn11aQ9R053 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC1.77□□□□□ -2.13
Scn11aQ9R053 Gm42834-201ENSMUST00000196845 256 ntBASIC1.77□□□□□ -2.13
Scn11aQ9R053 Gm6059-201ENSMUST00000196903 340 ntBASIC1.77□□□□□ -2.13
Scn11aQ9R053 Gm43739-201ENSMUST00000198294 307 ntBASIC1.77□□□□□ -2.13
Scn11aQ9R053 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC1.77□□□□□ -2.13
Scn11aQ9R053 Gm12386-201ENSMUST00000117380 688 ntBASIC1.77□□□□□ -2.13
Scn11aQ9R053 Gm27698-201ENSMUST00000184060 249 ntBASIC1.77□□□□□ -2.13
Scn11aQ9R053 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC1.77□□□□□ -2.13
Scn11aQ9R053 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Scn11aQ9R053 Gm44288-201ENSMUST00000205061 2795 ntBASIC1.77□□□□□ -2.13
Scn11aQ9R053 Gm14537-201ENSMUST00000117464 599 ntBASIC1.76□□□□□ -2.13
Scn11aQ9R053 Gm15001-201ENSMUST00000117657 795 ntBASIC1.76□□□□□ -2.13
Scn11aQ9R053 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Scn11aQ9R053 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.76□□□□□ -2.13
Scn11aQ9R053 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.76□□□□□ -2.13
Scn11aQ9R053 Gm24207-201ENSMUST00000082781 108 ntBASIC1.76□□□□□ -2.13
Scn11aQ9R053 Gm7164-201ENSMUST00000117503 450 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 Gm12351-201ENSMUST00000118727 292 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 Gm11556-201ENSMUST00000120751 288 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC1.75□□□□□ -2.13
Scn11aQ9R053 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Scn11aQ9R053 Gm22843-201ENSMUST00000157710 134 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 Gm22386-201ENSMUST00000158192 129 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 Gm27864-201ENSMUST00000183704 190 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 Gm37119-201ENSMUST00000195691 389 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 AC105169.1-201ENSMUST00000218912 1294 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Scn11aQ9R053 Mir221-201ENSMUST00000083488 95 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Scn11aQ9R053 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Scn11aQ9R053 Gm13355-201ENSMUST00000117996 317 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 Gm22107-201ENSMUST00000122548 100 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
Scn11aQ9R053 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
Scn11aQ9R053 Gm27025-201ENSMUST00000182392 942 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Scn11aQ9R053 Gm44059-201ENSMUST00000204048 351 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.75□□□□□ -2.13
Scn11aQ9R053 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Scn11aQ9R053 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Scn11aQ9R053 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Scn11aQ9R053 Gm12448-201ENSMUST00000118852 655 ntBASIC1.74□□□□□ -2.13
Scn11aQ9R053 Gm13273-201ENSMUST00000119737 159 ntBASIC1.74□□□□□ -2.13
Scn11aQ9R053 Gm23328-201ENSMUST00000157418 132 ntBASIC1.74□□□□□ -2.13
Scn11aQ9R053 Gm27248-201ENSMUST00000184004 166 ntBASIC1.74□□□□□ -2.13
Scn11aQ9R053 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.74□□□□□ -2.13
Scn11aQ9R053 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC1.74□□□□□ -2.13
Scn11aQ9R053 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
Scn11aQ9R053 CT025157.1-201ENSMUST00000226241 292 ntBASIC1.74□□□□□ -2.13
Scn11aQ9R053 AC123860.1-201ENSMUST00000228033 481 ntBASIC1.74□□□□□ -2.13
Scn11aQ9R053 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Scn11aQ9R053 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Scn11aQ9R053 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Scn11aQ9R053 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Scn11aQ9R053 Gm25198-201ENSMUST00000178574 110 ntBASIC1.73□□□□□ -2.13
Scn11aQ9R053 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Scn11aQ9R053 Gm44845-201ENSMUST00000208773 335 ntBASIC1.73□□□□□ -2.13
Scn11aQ9R053 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.73□□□□□ -2.13
Scn11aQ9R053 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Scn11aQ9R053 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Scn11aQ9R053 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
Scn11aQ9R053 Gm23558-201ENSMUST00000157823 80 ntBASIC1.72□□□□□ -2.13
Scn11aQ9R053 Gm22521-201ENSMUST00000158272 134 ntBASIC1.72□□□□□ -2.13
Scn11aQ9R053 Gm27233-201ENSMUST00000184030 307 ntBASIC1.72□□□□□ -2.13
Scn11aQ9R053 Gm36954-201ENSMUST00000195362 363 ntBASIC1.72□□□□□ -2.13
Scn11aQ9R053 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC1.72□□□□□ -2.13
Scn11aQ9R053 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC1.72□□□□□ -2.13
Scn11aQ9R053 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.72□□□□□ -2.13
Scn11aQ9R053 Gm20948-201ENSMUST00000211091 449 ntBASIC1.72□□□□□ -2.13
Scn11aQ9R053 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Scn11aQ9R053 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Scn11aQ9R053 Gm25526-201ENSMUST00000104332 132 ntBASIC1.71□□□□□ -2.14
Scn11aQ9R053 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.71□□□□□ -2.14
Scn11aQ9R053 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Scn11aQ9R053 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC1.71□□□□□ -2.14
Scn11aQ9R053 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 173.6 ms