Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm23506-201ENSMUST00000083077 107 ntBASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.37□□□□□ -2.03
Trem1Q9JKE2 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Gm25727-201ENSMUST00000104522 131 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Gm13876-201ENSMUST00000118451 261 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Gm11784-201ENSMUST00000118568 474 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Gm14593-201ENSMUST00000119948 294 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Gm9225-201ENSMUST00000121921 836 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Gm22187-201ENSMUST00000157819 129 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Gm23034-201ENSMUST00000158001 147 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Mir1927-201ENSMUST00000158579 109 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Snord93-201ENSMUST00000175580 71 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Gm28412-201ENSMUST00000187243 177 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Gm19140-201ENSMUST00000209790 421 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Gm45791-201ENSMUST00000212908 352 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Gm9845-201ENSMUST00000056409 598 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Mir27a-201ENSMUST00000083510 87 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Gm22866-201ENSMUST00000083947 177 ntBASIC2.36□□□□□ -2.03
Trem1Q9JKE2 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm13880-201ENSMUST00000118421 474 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm13510-201ENSMUST00000118659 429 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm22452-201ENSMUST00000122804 104 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm22554-201ENSMUST00000157798 147 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm23223-201ENSMUST00000158119 127 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm27676-201ENSMUST00000183669 61 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm27761-201ENSMUST00000184091 131 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm28591-201ENSMUST00000185259 183 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm19193-201ENSMUST00000190263 590 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm37085-201ENSMUST00000193780 196 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Mir5121-201ENSMUST00000198528 74 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm44988-201ENSMUST00000203835 1161 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm44818-201ENSMUST00000206608 358 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm44961-201ENSMUST00000207450 196 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm45387-201ENSMUST00000209792 632 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.35□□□□□ -2.03
Trem1Q9JKE2 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm7984-201ENSMUST00000060640 538 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm23925-201ENSMUST00000082471 132 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Gm26129-201ENSMUST00000082719 107 ntBASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trem1Q9JKE2 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trem1Q9JKE2 Gm24118-201ENSMUST00000103972 126 ntBASIC2.34□□□□□ -2.03
Trem1Q9JKE2 Gm22496-201ENSMUST00000104493 88 ntBASIC2.34□□□□□ -2.03
Trem1Q9JKE2 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trem1Q9JKE2 Mup-ps20-201ENSMUST00000121132 389 ntBASIC2.34□□□□□ -2.03
Trem1Q9JKE2 Gm12096-201ENSMUST00000121149 829 ntBASIC2.34□□□□□ -2.03
Trem1Q9JKE2 Gm11229-201ENSMUST00000121993 437 ntBASIC2.34□□□□□ -2.03
Trem1Q9JKE2 Gm22380-201ENSMUST00000157479 95 ntBASIC2.34□□□□□ -2.03
Trem1Q9JKE2 Gm24082-201ENSMUST00000175175 83 ntBASIC2.34□□□□□ -2.03
Trem1Q9JKE2 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.34□□□□□ -2.03
Trem1Q9JKE2 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
Trem1Q9JKE2 Gm25175-201ENSMUST00000178712 79 ntBASIC2.34□□□□□ -2.03
Trem1Q9JKE2 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trem1Q9JKE2 Gm37557-201ENSMUST00000191640 139 ntBASIC2.34□□□□□ -2.03
Trem1Q9JKE2 Mir3069-201ENSMUST00000198802 65 ntBASIC2.34□□□□□ -2.03
Trem1Q9JKE2 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trem1Q9JKE2 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trem1Q9JKE2 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.34□□□□□ -2.03
Trem1Q9JKE2 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.34□□□□□ -2.03
Trem1Q9JKE2 Gm22265-201ENSMUST00000082947 116 ntBASIC2.34□□□□□ -2.03
Trem1Q9JKE2 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Trem1Q9JKE2 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
Trem1Q9JKE2 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Trem1Q9JKE2 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm25764-201ENSMUST00000104092 134 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 n-R5s31-201ENSMUST00000104162 110 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm25420-201ENSMUST00000104216 127 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm12156-201ENSMUST00000119188 554 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm14656-201ENSMUST00000120342 502 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm23326-201ENSMUST00000157419 105 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm24730-201ENSMUST00000158228 117 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm23819-201ENSMUST00000158744 109 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm6395-201ENSMUST00000167639 691 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm18520-201ENSMUST00000174783 658 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms