Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm19694-201ENSMUST00000192364 505 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm5322-201ENSMUST00000206142 699 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trim54Q9ERP3 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm9845-201ENSMUST00000056409 598 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm22245-201ENSMUST00000082479 103 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm23614-201ENSMUST00000082598 107 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm22974-201ENSMUST00000083301 103 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Trim54Q9ERP3 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Trim54Q9ERP3 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Gm25308-201ENSMUST00000104171 158 ntBASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Gm6806-201ENSMUST00000120092 1006 ntBASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Gm15244-201ENSMUST00000121122 130 ntBASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Gm11384-201ENSMUST00000121376 303 ntBASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Gm16354-201ENSMUST00000155376 150 ntBASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Gm23234-201ENSMUST00000157304 134 ntBASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Gm7039-201ENSMUST00000205138 346 ntBASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Gm30155-201ENSMUST00000223458 339 ntBASIC3.58□□□□□ -1.84
Trim54Q9ERP3 AC154245.1-201ENSMUST00000224615 601 ntBASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Gm9818-201ENSMUST00000050900 255 ntBASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Rny3-201ENSMUST00000083011 102 ntBASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim54Q9ERP3 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Gm15142-201ENSMUST00000121013 856 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Gm15899-201ENSMUST00000128586 238 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Gm24546-201ENSMUST00000158652 102 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Gm9892-201ENSMUST00000182415 992 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Mir7k-201ENSMUST00000184115 110 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Gm28399-201ENSMUST00000186221 318 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Gm28572-201ENSMUST00000187444 318 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Gm37743-201ENSMUST00000194645 376 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Gm44324-201ENSMUST00000198517 135 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Gm43884-201ENSMUST00000204251 559 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trim54Q9ERP3 CT025606.1-201ENSMUST00000218273 324 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Gm9370-201ENSMUST00000222787 609 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Gm26129-201ENSMUST00000082719 107 ntBASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
Trim54Q9ERP3 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm22831-201ENSMUST00000102473 109 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm24889-201ENSMUST00000104388 132 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm13761-201ENSMUST00000117238 807 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm11420-201ENSMUST00000120047 402 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm26027-201ENSMUST00000122725 268 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm24518-201ENSMUST00000180275 94 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm19193-201ENSMUST00000190263 590 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm37290-201ENSMUST00000195775 339 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm18384-201ENSMUST00000195974 808 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm43367-201ENSMUST00000199986 625 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm25203-202ENSMUST00000200458 216 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm5374-201ENSMUST00000222868 657 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms