Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm24871-201ENSMUST00000083099 116 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm23452-201ENSMUST00000083327 107 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm25126-201ENSMUST00000083343 102 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Rnu5g-201ENSMUST00000093721 116 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm23472-201ENSMUST00000101806 191 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm25168-201ENSMUST00000104189 132 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm13806-201ENSMUST00000117822 325 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm14918-201ENSMUST00000118153 268 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm13087-201ENSMUST00000118298 256 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm13751-201ENSMUST00000120280 752 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm24497-201ENSMUST00000177868 191 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm25939-201ENSMUST00000179876 191 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm37557-201ENSMUST00000191640 139 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Mir7217-201ENSMUST00000200304 62 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm44295-201ENSMUST00000203805 437 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm23444-201ENSMUST00000082922 191 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm23102-201ENSMUST00000083724 116 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm22866-201ENSMUST00000083947 177 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
Lima1Q9ERG0 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Mir1192-201ENSMUST00000116976 121 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm14073-201ENSMUST00000117344 381 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm12386-201ENSMUST00000117380 688 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm14554-201ENSMUST00000119548 661 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm5287-201ENSMUST00000120666 598 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm13502-201ENSMUST00000121574 684 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Defa-ps6-201ENSMUST00000122172 282 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm14363-201ENSMUST00000122304 409 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm23559-201ENSMUST00000157824 103 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm24857-201ENSMUST00000158061 310 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm22500-201ENSMUST00000158982 99 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm24086-201ENSMUST00000175171 98 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Mir3075-201ENSMUST00000175340 85 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Mup-ps8-201ENSMUST00000178663 545 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Mup-ps6-201ENSMUST00000179564 545 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm27369-201ENSMUST00000185182 71 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Trbv6-201ENSMUST00000193743 276 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm43193-201ENSMUST00000197732 441 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm19147-201ENSMUST00000199622 652 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm19252-201ENSMUST00000204705 305 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm6796-201ENSMUST00000211919 243 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 AC115047.1-201ENSMUST00000213795 322 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm19118-201ENSMUST00000222554 98 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Mir208a-201ENSMUST00000083498 83 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Mir127-201ENSMUST00000093568 70 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Gm21286-201ENSMUST00000098035 545 ntBASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Lima1Q9ERG0 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Lima1Q9ERG0 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Gm25376-201ENSMUST00000104340 133 ntBASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Gm12598-201ENSMUST00000117333 830 ntBASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Gm14566-201ENSMUST00000118915 321 ntBASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Gm11357-201ENSMUST00000119758 954 ntBASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Snrpert-201ENSMUST00000121967 279 ntBASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Gm22339-201ENSMUST00000157718 62 ntBASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Gm6059-201ENSMUST00000196903 340 ntBASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Gm44966-201ENSMUST00000208096 157 ntBASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Gm3442-201ENSMUST00000216808 710 ntBASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Lima1Q9ERG0 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 120.9 ms