Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm15157-201ENSMUST00000121852 702 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 Gm23463-201ENSMUST00000122468 99 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 Gm24061-201ENSMUST00000157489 120 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3□□□□□ -1.93
Scn4aQ9ER60 Mir9-3-201ENSMUST00000175497 90 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3□□□□□ -1.93
Scn4aQ9ER60 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC3□□□□□ -1.93
Scn4aQ9ER60 Gm6615-201ENSMUST00000199426 631 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 Gm19649-201ENSMUST00000201126 822 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3□□□□□ -1.93
Scn4aQ9ER60 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC3□□□□□ -1.93
Scn4aQ9ER60 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3□□□□□ -1.93
Scn4aQ9ER60 AC101945.3-201ENSMUST00000226568 153 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 CT572983.1-201ENSMUST00000226895 514 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Scn4aQ9ER60 Gm22683-201ENSMUST00000082854 137 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Scn4aQ9ER60 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Gm13731-201ENSMUST00000117332 196 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Gm12656-201ENSMUST00000118149 577 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Gm6923-201ENSMUST00000118343 406 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Gm15244-201ENSMUST00000121122 130 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Gm16412-201ENSMUST00000121602 273 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Gm25979-201ENSMUST00000157177 138 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Gm24478-201ENSMUST00000157439 158 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Gm10177-202ENSMUST00000161698 207 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Gm44083-201ENSMUST00000203114 337 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Gm45146-201ENSMUST00000207108 221 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Gm20304-201ENSMUST00000218168 444 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.99□□□□□ -1.93
Scn4aQ9ER60 Gm25090-201ENSMUST00000104000 132 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm11490-201ENSMUST00000118128 272 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm23716-201ENSMUST00000157348 144 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm25666-201ENSMUST00000157702 107 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm24237-201ENSMUST00000157790 132 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.98□□□□□ -1.93
Scn4aQ9ER60 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Scn4aQ9ER60 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm7123-201ENSMUST00000117647 213 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm15312-201ENSMUST00000118827 271 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm13678-201ENSMUST00000118926 340 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm15309-201ENSMUST00000121644 240 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm14804-201ENSMUST00000122322 508 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm14903-201ENSMUST00000122435 537 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm26345-201ENSMUST00000157534 120 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm24736-201ENSMUST00000158862 130 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Mir6394-201ENSMUST00000184738 99 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm28412-201ENSMUST00000187243 177 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm44988-201ENSMUST00000203835 1161 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm5317-201ENSMUST00000204445 847 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.98□□□□□ -1.93
Scn4aQ9ER60 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 AC162934.3-201ENSMUST00000223015 841 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Scn4aQ9ER60 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Scn4aQ9ER60 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Scn4aQ9ER60 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.97□□□□□ -1.93
Scn4aQ9ER60 Mir6411-201ENSMUST00000183556 108 ntBASIC2.97□□□□□ -1.93
Scn4aQ9ER60 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Scn4aQ9ER60 Gm5322-201ENSMUST00000206142 699 ntBASIC2.97□□□□□ -1.93
Scn4aQ9ER60 Gm18645-201ENSMUST00000209593 651 ntBASIC2.97□□□□□ -1.93
Scn4aQ9ER60 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.97□□□□□ -1.93
Scn4aQ9ER60 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.97□□□□□ -1.93
Scn4aQ9ER60 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.97□□□□□ -1.93
Scn4aQ9ER60 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Scn4aQ9ER60 Gm6369-201ENSMUST00000069626 412 ntBASIC2.97□□□□□ -1.93
Scn4aQ9ER60 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC2.97□□□□□ -1.93
Scn4aQ9ER60 Gm25792-201ENSMUST00000083289 100 ntBASIC2.97□□□□□ -1.93
Scn4aQ9ER60 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Scn4aQ9ER60 Gm11577-201ENSMUST00000118030 737 ntBASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Mir6985-201ENSMUST00000184641 61 ntBASIC2.96□□□□□ -1.94
Scn4aQ9ER60 AC113305.1-201ENSMUST00000214664 724 ntBASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Gm26128-201ENSMUST00000083170 110 ntBASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Gm3940-201ENSMUST00000105087 432 ntBASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Gm15125-201ENSMUST00000116185 800 ntBASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Gm12803-201ENSMUST00000118907 821 ntBASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Gm5646-201ENSMUST00000120568 714 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms