Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm22486-201ENSMUST00000116815 137 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm13880-201ENSMUST00000118421 474 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm11219-201ENSMUST00000118565 358 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm11943-201ENSMUST00000119473 327 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm14593-201ENSMUST00000119948 294 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm14815-201ENSMUST00000120060 488 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm11556-201ENSMUST00000120751 288 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm11430-201ENSMUST00000121317 217 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm23867-201ENSMUST00000122649 274 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm17065-201ENSMUST00000165245 239 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm4468-201ENSMUST00000170206 294 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm20415-201ENSMUST00000172877 423 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm27676-201ENSMUST00000183669 61 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm28900-201ENSMUST00000185232 156 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm37692-201ENSMUST00000192633 232 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm37319-201ENSMUST00000193500 636 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm37987-201ENSMUST00000194999 825 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm43264-201ENSMUST00000202284 325 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm17911-201ENSMUST00000210806 877 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm18252-203ENSMUST00000215855 757 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm24622-201ENSMUST00000082619 162 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Mir208a-201ENSMUST00000083498 83 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.35□□□□□ -2.03
Cdc40Q9DC48 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Gm24670-201ENSMUST00000104154 132 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Gm12935-201ENSMUST00000119352 246 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Gm6574-201ENSMUST00000120037 362 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Gm14898-201ENSMUST00000120202 645 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Gm13406-201ENSMUST00000121991 256 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Gm23032-201ENSMUST00000157995 107 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Gm23704-201ENSMUST00000158844 340 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Mir6541-201ENSMUST00000183649 110 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Gm29045-201ENSMUST00000187278 698 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Gm44555-201ENSMUST00000209008 148 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Gm45678-201ENSMUST00000210509 295 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Gm45912-201ENSMUST00000210646 543 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Cdc40Q9DC48 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.34□□□□□ -2.03
Cdc40Q9DC48 AC120540.1-201ENSMUST00000221879 324 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Mir465-201ENSMUST00000093563 74 ntBASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Cdc40Q9DC48 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Cdc40Q9DC48 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Cdc40Q9DC48 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Gm26015-201ENSMUST00000104402 125 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Gm14931-201ENSMUST00000111079 253 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Gm12617-201ENSMUST00000121268 381 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Gm26275-201ENSMUST00000157101 268 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Gm26348-201ENSMUST00000157528 240 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Gm23559-201ENSMUST00000157824 103 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Gm21827-201ENSMUST00000178247 423 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Mir6353-201ENSMUST00000183596 113 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Gm21489-201ENSMUST00000189668 818 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Gm44060-201ENSMUST00000204440 410 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Gm45173-201ENSMUST00000206819 305 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Gm45879-201ENSMUST00000212521 392 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Cdc40Q9DC48 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 AC168062.2-201ENSMUST00000228907 422 ntBASIC2.33□□□□□ -2.04
Cdc40Q9DC48 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms