Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm22159-201ENSMUST00000158412 130 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Mir1927-201ENSMUST00000158579 109 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Mir6338-201ENSMUST00000183389 109 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Mir7017-201ENSMUST00000184894 62 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Gm18448-201ENSMUST00000186286 599 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Gm6651-201ENSMUST00000189471 271 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Mir3069-201ENSMUST00000198802 65 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Gm44657-201ENSMUST00000208568 450 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Gm45614-201ENSMUST00000209994 721 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Gm23452-201ENSMUST00000083327 107 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.15□□□□□ -2.06
Ccdc3Q9D6Y1 Gm11460-201ENSMUST00000118200 361 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Gm13087-201ENSMUST00000118298 256 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Gm14566-201ENSMUST00000118915 321 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Gm12640-201ENSMUST00000120097 310 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Gm12607-201ENSMUST00000120724 493 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Gm25910-201ENSMUST00000157620 140 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Gm24900-201ENSMUST00000158128 134 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Gm8292-201ENSMUST00000162574 396 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Gm17064-201ENSMUST00000167690 452 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Gm8403-201ENSMUST00000189712 1298 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Gm45395-201ENSMUST00000209891 559 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Gm45696-201ENSMUST00000212088 985 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Gm24661-201ENSMUST00000083205 104 ntBASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Ccdc3Q9D6Y1 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm14794-201ENSMUST00000118181 192 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm13085-201ENSMUST00000118356 171 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm13627-201ENSMUST00000119700 706 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm12881-201ENSMUST00000121191 203 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm13555-201ENSMUST00000121668 319 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm16355-201ENSMUST00000128606 231 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm26186-201ENSMUST00000157689 125 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm24959-201ENSMUST00000157924 146 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm24552-201ENSMUST00000158646 103 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm27520-201ENSMUST00000184872 81 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Mir6372-201ENSMUST00000185114 109 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm28779-201ENSMUST00000189678 323 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Mir7232-201ENSMUST00000197929 74 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm43512-201ENSMUST00000198495 176 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm45530-201ENSMUST00000211658 225 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 AC069561.3-201ENSMUST00000217321 114 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm18338-201ENSMUST00000222381 560 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Platr25-208ENSMUST00000222602 939 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 AC158388.1-201ENSMUST00000225441 256 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm23723-201ENSMUST00000082996 132 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.14□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm42721-201ENSMUST00000197165 1523 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm13728-201ENSMUST00000117471 400 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm12706-201ENSMUST00000121588 698 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm14411-201ENSMUST00000121798 914 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Snrpert-201ENSMUST00000121967 279 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm23885-201ENSMUST00000122682 294 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm25979-201ENSMUST00000157177 138 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm22560-201ENSMUST00000157332 120 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm23670-201ENSMUST00000157469 119 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm25666-201ENSMUST00000157702 107 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm24177-201ENSMUST00000158927 131 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm16326-201ENSMUST00000162843 414 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Mir7026-201ENSMUST00000184384 67 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Mir6371-201ENSMUST00000184470 111 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm28951-201ENSMUST00000190742 313 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm32033-201ENSMUST00000193483 339 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms