Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 AC164297.5-201ENSMUST00000224365 198 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm12225-201ENSMUST00000117995 298 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm14945-201ENSMUST00000119556 1118 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm25945-201ENSMUST00000122484 135 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm24532-201ENSMUST00000157951 286 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm23032-201ENSMUST00000157995 107 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm26271-201ENSMUST00000158349 104 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm22839-201ENSMUST00000158436 304 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm24922-201ENSMUST00000158511 102 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm23473-201ENSMUST00000158883 116 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm27330-201ENSMUST00000184689 132 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm28412-201ENSMUST00000187243 177 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm28802-201ENSMUST00000188624 944 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm44449-201ENSMUST00000203610 153 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 AC158521.1-201ENSMUST00000225295 660 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Gm22507-201ENSMUST00000082773 160 ntBASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc39Q9D5Y1 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Gm26002-201ENSMUST00000101915 107 ntBASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Gm23577-201ENSMUST00000103950 110 ntBASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Gm11268-201ENSMUST00000118347 267 ntBASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Gm14566-201ENSMUST00000118915 321 ntBASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Gm12891-201ENSMUST00000119358 240 ntBASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Gm14841-201ENSMUST00000121067 758 ntBASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Gm4916-201ENSMUST00000126139 642 ntBASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Gm24082-201ENSMUST00000175175 83 ntBASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Gm26960-201ENSMUST00000182263 412 ntBASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Gm18775-201ENSMUST00000190763 586 ntBASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Gm18956-201ENSMUST00000192857 480 ntBASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Gm43232-201ENSMUST00000201346 364 ntBASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.12□□□□□ -1.91
Ccdc39Q9D5Y1 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm25213-201ENSMUST00000102388 113 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm12607-201ENSMUST00000120724 493 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm14915-201ENSMUST00000120747 204 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm14129-201ENSMUST00000122436 291 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm25107-201ENSMUST00000122472 129 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm25666-201ENSMUST00000157702 107 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm27428-201ENSMUST00000184289 110 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm29330-201ENSMUST00000190032 699 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm28098-201ENSMUST00000191361 699 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm9696-202ENSMUST00000191541 830 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm37732-201ENSMUST00000194377 316 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm44966-201ENSMUST00000208096 157 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 AC110380.1-201ENSMUST00000226987 389 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm10038-201ENSMUST00000077233 441 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc39Q9D5Y1 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ccdc39Q9D5Y1 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.1□□□□□ -1.91
Ccdc39Q9D5Y1 Mir682-201ENSMUST00000102281 96 ntBASIC3.1□□□□□ -1.91
Ccdc39Q9D5Y1 Gm22591-201ENSMUST00000104243 106 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms