Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm43955-201ENSMUST00000204332 142 ntBASIC3.08□□□□□ -1.92
Ccdc43Q9CR29 Gm45387-201ENSMUST00000209792 632 ntBASIC3.08□□□□□ -1.92
Ccdc43Q9CR29 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC3.08□□□□□ -1.92
Ccdc43Q9CR29 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Ccdc43Q9CR29 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.08□□□□□ -1.92
Ccdc43Q9CR29 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.08□□□□□ -1.92
Ccdc43Q9CR29 Gm9370-201ENSMUST00000222787 609 ntBASIC3.08□□□□□ -1.92
Ccdc43Q9CR29 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ccdc43Q9CR29 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
Ccdc43Q9CR29 Gm26206-201ENSMUST00000082908 110 ntBASIC3.08□□□□□ -1.92
Ccdc43Q9CR29 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ccdc43Q9CR29 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Gm3940-201ENSMUST00000105087 432 ntBASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Gm14897-201ENSMUST00000118213 207 ntBASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Gm22322-201ENSMUST00000157151 111 ntBASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Gm26271-201ENSMUST00000158349 104 ntBASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Gm24768-201ENSMUST00000158512 94 ntBASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Snord93-201ENSMUST00000175580 71 ntBASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Gm23190-201ENSMUST00000180307 64 ntBASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Gm44050-201ENSMUST00000204263 527 ntBASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Gm22061-201ENSMUST00000082557 107 ntBASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Gm23615-201ENSMUST00000082602 65 ntBASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Gm24948-201ENSMUST00000082866 207 ntBASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc43Q9CR29 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm22497-201ENSMUST00000104499 131 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm14932-201ENSMUST00000117112 453 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm14602-201ENSMUST00000118625 340 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm14428-201ENSMUST00000120408 822 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm11456-201ENSMUST00000121070 256 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm23470-201ENSMUST00000157129 120 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm26041-201ENSMUST00000158148 108 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm24897-201ENSMUST00000179033 107 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm4076-201ENSMUST00000179230 965 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Mir6405-201ENSMUST00000184584 124 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm29516-201ENSMUST00000190402 468 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm37616-201ENSMUST00000193974 322 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm44961-201ENSMUST00000207450 196 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 AC115047.1-201ENSMUST00000213795 322 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 CT009550.5-201ENSMUST00000226286 382 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 AC117202.3-201ENSMUST00000228532 310 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm9174-201ENSMUST00000078149 255 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Gm22974-201ENSMUST00000083301 103 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc43Q9CR29 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 AC154511.1-201ENSMUST00000222578 1587 ntBASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Gm25088-201ENSMUST00000101803 79 ntBASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Gm26377-201ENSMUST00000102184 108 ntBASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Gm14841-201ENSMUST00000121067 758 ntBASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Gm23111-201ENSMUST00000122652 105 ntBASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Gm16588-201ENSMUST00000162889 355 ntBASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Gm27330-201ENSMUST00000184689 132 ntBASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Gm28358-202ENSMUST00000189292 223 ntBASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Gm19326-201ENSMUST00000219818 326 ntBASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.05□□□□□ -1.92
Ccdc43Q9CR29 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Mir542-201ENSMUST00000102186 85 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Gm25563-201ENSMUST00000104603 74 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Gm5287-201ENSMUST00000120666 598 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Gm8080-201ENSMUST00000122046 1155 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms