Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Use1Q9CQ56 Gm27379-201ENSMUST00000183730 123 ntBASIC2.33□□□□□ -2.04
Use1Q9CQ56 Mir8118-201ENSMUST00000183962 129 ntBASIC2.33□□□□□ -2.04
Use1Q9CQ56 Gm20915-201ENSMUST00000191575 663 ntBASIC2.33□□□□□ -2.04
Use1Q9CQ56 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.33□□□□□ -2.04
Use1Q9CQ56 Gm42958-201ENSMUST00000197595 318 ntBASIC2.33□□□□□ -2.04
Use1Q9CQ56 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.33□□□□□ -2.04
Use1Q9CQ56 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Use1Q9CQ56 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Use1Q9CQ56 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.33□□□□□ -2.04
Use1Q9CQ56 AC120540.1-201ENSMUST00000221879 324 ntBASIC2.33□□□□□ -2.04
Use1Q9CQ56 CT571268.1-201ENSMUST00000222320 407 ntBASIC2.33□□□□□ -2.04
Use1Q9CQ56 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.33□□□□□ -2.04
Use1Q9CQ56 Gm9762-201ENSMUST00000036976 444 ntBASIC2.33□□□□□ -2.04
Use1Q9CQ56 Gm5471-201ENSMUST00000072732 337 ntBASIC2.33□□□□□ -2.04
Use1Q9CQ56 Gm10025-201ENSMUST00000079568 372 ntBASIC2.33□□□□□ -2.04
Use1Q9CQ56 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.33□□□□□ -2.04
Use1Q9CQ56 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Use1Q9CQ56 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Use1Q9CQ56 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.33□□□□□ -2.04
Use1Q9CQ56 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Use1Q9CQ56 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Use1Q9CQ56 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Use1Q9CQ56 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm14657-201ENSMUST00000117461 302 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm14594-201ENSMUST00000118052 537 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm2003-201ENSMUST00000118537 636 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm14590-201ENSMUST00000118934 537 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm15029-201ENSMUST00000119742 199 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm24771-201ENSMUST00000158508 137 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm26215-201ENSMUST00000158584 139 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm4540-201ENSMUST00000170669 429 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm21638-201ENSMUST00000179473 836 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm26189-201ENSMUST00000179879 107 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm14596-201ENSMUST00000180268 537 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm14595-201ENSMUST00000180335 537 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm29452-201ENSMUST00000187996 313 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm28860-201ENSMUST00000188103 313 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm28951-201ENSMUST00000190742 313 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm32033-201ENSMUST00000193483 339 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Use1Q9CQ56 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Use1Q9CQ56 Gm25411-201ENSMUST00000083760 151 ntBASIC2.32□□□□□ -2.04
Use1Q9CQ56 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Use1Q9CQ56 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
Use1Q9CQ56 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm14881-201ENSMUST00000120366 372 ntBASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm13913-201ENSMUST00000121126 260 ntBASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.31□□□□□ -2.04
Use1Q9CQ56 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm25979-201ENSMUST00000157177 138 ntBASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm24911-201ENSMUST00000157292 136 ntBASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm24212-201ENSMUST00000158258 132 ntBASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.31□□□□□ -2.04
Use1Q9CQ56 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm43626-201ENSMUST00000198575 162 ntBASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm43264-201ENSMUST00000202284 325 ntBASIC2.31□□□□□ -2.04
Use1Q9CQ56 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.31□□□□□ -2.04
Use1Q9CQ56 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm8031-201ENSMUST00000213430 626 ntBASIC2.31□□□□□ -2.04
Use1Q9CQ56 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.31□□□□□ -2.04
Use1Q9CQ56 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC2.31□□□□□ -2.04
Use1Q9CQ56 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm19118-201ENSMUST00000222554 98 ntBASIC2.31□□□□□ -2.04
Use1Q9CQ56 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.31□□□□□ -2.04
Use1Q9CQ56 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.31□□□□□ -2.04
Use1Q9CQ56 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.31□□□□□ -2.04
Use1Q9CQ56 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.3□□□□□ -2.04
Use1Q9CQ56 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Use1Q9CQ56 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Use1Q9CQ56 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Use1Q9CQ56 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.3□□□□□ -2.04
Use1Q9CQ56 Gm26154-201ENSMUST00000102339 96 ntBASIC2.3□□□□□ -2.04
Use1Q9CQ56 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.3□□□□□ -2.04
Use1Q9CQ56 Gm15760-201ENSMUST00000119553 283 ntBASIC2.3□□□□□ -2.04
Use1Q9CQ56 Gm13482-201ENSMUST00000119842 254 ntBASIC2.3□□□□□ -2.04
Use1Q9CQ56 Gm6574-201ENSMUST00000120037 362 ntBASIC2.3□□□□□ -2.04
Use1Q9CQ56 Gm25321-201ENSMUST00000122558 102 ntBASIC2.3□□□□□ -2.04
Use1Q9CQ56 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.3□□□□□ -2.04
Use1Q9CQ56 Gm23668-201ENSMUST00000157465 111 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms