Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm37098-201ENSMUST00000192290 244 ntBASIC1.61□□□□□ -2.15
Nup35Q8R4R6 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.61□□□□□ -2.15
Nup35Q8R4R6 Gm43804-201ENSMUST00000198280 456 ntBASIC1.61□□□□□ -2.15
Nup35Q8R4R6 Igkv11-118-201ENSMUST00000199448 346 ntBASIC1.61□□□□□ -2.15
Nup35Q8R4R6 Mir497-201ENSMUST00000200557 84 ntBASIC1.61□□□□□ -2.15
Nup35Q8R4R6 AC157017.2-201ENSMUST00000218354 777 ntBASIC1.61□□□□□ -2.15
Nup35Q8R4R6 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC1.61□□□□□ -2.15
Nup35Q8R4R6 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Nup35Q8R4R6 Gm23939-201ENSMUST00000082880 133 ntBASIC1.61□□□□□ -2.15
Nup35Q8R4R6 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Nup35Q8R4R6 Gm44049-201ENSMUST00000204905 2984 ntBASIC1.61□□□□□ -2.15
Nup35Q8R4R6 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Nup35Q8R4R6 Gm7648-201ENSMUST00000173036 1658 ntBASIC1.61□□□□□ -2.15
Nup35Q8R4R6 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Nup35Q8R4R6 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm25090-201ENSMUST00000104000 132 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm22270-201ENSMUST00000104034 132 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm15846-201ENSMUST00000116022 320 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm16431-201ENSMUST00000117454 431 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm15176-201ENSMUST00000117734 135 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm14815-201ENSMUST00000120060 488 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm24783-201ENSMUST00000157639 100 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm17072-201ENSMUST00000166673 658 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Mir7047-201ENSMUST00000184595 64 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm27979-201ENSMUST00000185126 56 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm44300-201ENSMUST00000196792 121 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm44472-201ENSMUST00000204922 943 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm29920-201ENSMUST00000206876 754 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm20304-201ENSMUST00000218168 444 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Nup35Q8R4R6 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Snord14d-201ENSMUST00000083424 86 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.6□□□□□ -2.15
Nup35Q8R4R6 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Mir344c-201ENSMUST00000103919 92 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Gm24984-201ENSMUST00000104454 133 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Gm14731-201ENSMUST00000119216 376 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Gm14848-201ENSMUST00000121850 467 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Gm16355-201ENSMUST00000128606 231 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Gm26275-201ENSMUST00000157101 268 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Gm24911-201ENSMUST00000157292 136 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Gm23137-201ENSMUST00000157559 107 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Gm25368-201ENSMUST00000158847 131 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Mir3473c-201ENSMUST00000175262 81 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Gm22307-201ENSMUST00000180019 107 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Gm27544-201ENSMUST00000185069 155 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Gm44393-201ENSMUST00000197418 138 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Gm3724-201ENSMUST00000197957 349 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Igkv11-114-201ENSMUST00000200013 346 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Mir93-201ENSMUST00000083593 88 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Gm24698-201ENSMUST00000083883 130 ntBASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Nup35Q8R4R6 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.16
Nup35Q8R4R6 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Nup35Q8R4R6 Gm15159-201ENSMUST00000117062 764 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gm14670-201ENSMUST00000117327 337 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gm15896-201ENSMUST00000118045 440 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gm8217-201ENSMUST00000119136 465 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gm22960-201ENSMUST00000122517 104 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gm25961-201ENSMUST00000157174 135 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Mir3075-201ENSMUST00000175340 85 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gm23933-201ENSMUST00000178405 79 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gm29641-201ENSMUST00000188955 259 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gm19224-201ENSMUST00000190477 793 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gm43587-201ENSMUST00000199590 204 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gm18645-201ENSMUST00000209593 651 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gm18338-201ENSMUST00000222381 560 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gm23628-201ENSMUST00000082464 173 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gm25124-201ENSMUST00000083345 164 ntBASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Nup35Q8R4R6 Gm24098-201ENSMUST00000102075 109 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms