Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm13880-201ENSMUST00000118421 474 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm14875-201ENSMUST00000120881 319 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm11281-201ENSMUST00000141391 576 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm25967-201ENSMUST00000157168 147 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm25965-201ENSMUST00000157170 93 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm27510-201ENSMUST00000158214 64 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Mir8106-201ENSMUST00000184520 139 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm28304-201ENSMUST00000185977 312 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm18357-201ENSMUST00000188184 580 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm29256-201ENSMUST00000189094 312 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm28484-201ENSMUST00000190606 312 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Clrn1Q8K445 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm43415-201ENSMUST00000201934 750 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm8940-201ENSMUST00000212585 219 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm23055-201ENSMUST00000082805 94 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Mir10a-201ENSMUST00000083585 110 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Rny1-201ENSMUST00000083767 112 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm10222-201ENSMUST00000088336 294 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
Clrn1Q8K445 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Clrn1Q8K445 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Clrn1Q8K445 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Clrn1Q8K445 AC160130.1-201ENSMUST00000220734 2735 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm23142-201ENSMUST00000101848 105 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm26240-201ENSMUST00000101893 105 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm24125-201ENSMUST00000104105 137 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm14825-201ENSMUST00000113538 701 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm14586-201ENSMUST00000119571 408 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm11600-201ENSMUST00000119592 240 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm23887-201ENSMUST00000122683 172 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm14298-201ENSMUST00000139032 237 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm16356-201ENSMUST00000143300 169 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm22789-201ENSMUST00000157884 130 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm24898-201ENSMUST00000158133 106 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm24552-201ENSMUST00000158646 103 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Mir3104-201ENSMUST00000174911 63 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm24085-201ENSMUST00000175172 116 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm27834-201ENSMUST00000183427 125 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm28148-201ENSMUST00000186924 697 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm45403-201ENSMUST00000209453 276 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm46998-201ENSMUST00000221444 330 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm25411-201ENSMUST00000083760 151 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
Clrn1Q8K445 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Clrn1Q8K445 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Clrn1Q8K445 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Clrn1Q8K445 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.81□□□□□ -1.8
Clrn1Q8K445 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Clrn1Q8K445 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Clrn1Q8K445 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Clrn1Q8K445 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm37461-201ENSMUST00000193929 3704 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Clrn1Q8K445 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Clrn1Q8K445 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Clrn1Q8K445 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm13439-201ENSMUST00000117541 409 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm7618-201ENSMUST00000121643 171 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm13725-201ENSMUST00000122139 207 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm14473-201ENSMUST00000122269 557 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm26320-201ENSMUST00000157742 306 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm23554-201ENSMUST00000157818 110 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm23557-201ENSMUST00000157820 138 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm24858-201ENSMUST00000158058 323 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm29147-201ENSMUST00000186846 315 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm29227-201ENSMUST00000187139 315 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm28534-201ENSMUST00000187744 676 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm29034-201ENSMUST00000188099 315 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm28160-201ENSMUST00000191229 315 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm9696-202ENSMUST00000191541 830 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm37129-201ENSMUST00000195791 315 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm25203-202ENSMUST00000200458 216 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm45365-201ENSMUST00000209489 256 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Gm25203-201ENSMUST00000082842 215 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Mir34b-201ENSMUST00000083558 84 ntBASIC3.8□□□□□ -1.8
Clrn1Q8K445 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Clrn1Q8K445 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Clrn1Q8K445 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms