Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm28755-201ENSMUST00000185773 199 ntBASIC3□□□□□ -1.93
Prpf39Q8K2Z2 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3□□□□□ -1.93
Prpf39Q8K2Z2 Gm37866-201ENSMUST00000191950 696 ntBASIC3□□□□□ -1.93
Prpf39Q8K2Z2 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3□□□□□ -1.93
Prpf39Q8K2Z2 Gm37743-201ENSMUST00000194645 376 ntBASIC3□□□□□ -1.93
Prpf39Q8K2Z2 Gm42509-201ENSMUST00000197390 781 ntBASIC3□□□□□ -1.93
Prpf39Q8K2Z2 Gm44223-201ENSMUST00000204854 114 ntBASIC3□□□□□ -1.93
Prpf39Q8K2Z2 Gm45105-201ENSMUST00000207824 397 ntBASIC3□□□□□ -1.93
Prpf39Q8K2Z2 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC3□□□□□ -1.93
Prpf39Q8K2Z2 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC3□□□□□ -1.93
Prpf39Q8K2Z2 AC156560.1-201ENSMUST00000221425 256 ntBASIC3□□□□□ -1.93
Prpf39Q8K2Z2 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3□□□□□ -1.93
Prpf39Q8K2Z2 AC167192.4-201ENSMUST00000224087 993 ntBASIC3□□□□□ -1.93
Prpf39Q8K2Z2 AC158521.1-201ENSMUST00000225295 660 ntBASIC3□□□□□ -1.93
Prpf39Q8K2Z2 AC109172.2-201ENSMUST00000228792 381 ntBASIC3□□□□□ -1.93
Prpf39Q8K2Z2 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC3□□□□□ -1.93
Prpf39Q8K2Z2 Gm25202-201ENSMUST00000082838 191 ntBASIC3□□□□□ -1.93
Prpf39Q8K2Z2 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Prpf39Q8K2Z2 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Prpf39Q8K2Z2 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Prpf39Q8K2Z2 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Mir669p-2-201ENSMUST00000103868 87 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Mir669p-1-201ENSMUST00000103884 87 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm22497-201ENSMUST00000104499 131 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm12393-201ENSMUST00000117084 848 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm11352-201ENSMUST00000119264 517 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm12155-201ENSMUST00000121267 160 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm23380-201ENSMUST00000158448 103 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm23704-201ENSMUST00000158844 340 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Mir3964-201ENSMUST00000174898 74 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm28474-201ENSMUST00000188501 315 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm29263-201ENSMUST00000188718 463 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm28779-201ENSMUST00000189678 323 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm45226-201ENSMUST00000206602 288 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm45395-201ENSMUST00000209891 559 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm45860-201ENSMUST00000212700 334 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 AC144733.1-201ENSMUST00000222893 1289 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Snora23-201ENSMUST00000082517 184 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm23645-201ENSMUST00000083228 108 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Mir208a-201ENSMUST00000083498 83 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Gm25411-201ENSMUST00000083760 151 ntBASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Prpf39Q8K2Z2 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm3940-201ENSMUST00000105087 432 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm22072-201ENSMUST00000116850 121 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm13614-201ENSMUST00000117306 503 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm9009-201ENSMUST00000117321 326 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm15760-201ENSMUST00000119553 283 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm12876-201ENSMUST00000120975 408 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm4076-201ENSMUST00000179230 965 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm24137-201ENSMUST00000180055 79 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm22391-201ENSMUST00000180356 79 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Mir7578-201ENSMUST00000183455 82 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm28283-201ENSMUST00000185509 178 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm28163-201ENSMUST00000187099 325 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm36984-201ENSMUST00000192770 235 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm43393-201ENSMUST00000200147 194 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm44425-201ENSMUST00000203739 429 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.98□□□□□ -1.93
Prpf39Q8K2Z2 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Prpf39Q8K2Z2 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Prpf39Q8K2Z2 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Prpf39Q8K2Z2 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.97□□□□□ -1.93
Prpf39Q8K2Z2 Gm26504-201ENSMUST00000102033 94 ntBASIC2.97□□□□□ -1.93
Prpf39Q8K2Z2 Gm13356-201ENSMUST00000121678 335 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms