Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm22970-201ENSMUST00000083304 186 ntBASIC3.42□□□□□ -1.86
Nup88Q8CEC0 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Nup88Q8CEC0 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Mir465c-2-201ENSMUST00000104757 81 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm15266-201ENSMUST00000119635 255 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm14785-201ENSMUST00000120185 539 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm13720-201ENSMUST00000120741 196 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm22957-201ENSMUST00000122511 123 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm25052-201ENSMUST00000122661 158 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Mir5123-201ENSMUST00000177794 83 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm28390-201ENSMUST00000185212 700 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm28163-201ENSMUST00000187099 325 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm42665-201ENSMUST00000202100 586 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm6842-201ENSMUST00000211361 390 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm18160-201ENSMUST00000214279 827 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm22810-201ENSMUST00000082741 158 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm22507-201ENSMUST00000082773 160 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm5670-201ENSMUST00000093546 372 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Mir465c-1-201ENSMUST00000093560 81 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.41□□□□□ -1.86
Nup88Q8CEC0 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.4□□□□□ -1.86
Nup88Q8CEC0 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Nup88Q8CEC0 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Nup88Q8CEC0 Gm12096-201ENSMUST00000121149 829 ntBASIC3.4□□□□□ -1.87
Nup88Q8CEC0 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.4□□□□□ -1.87
Nup88Q8CEC0 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.4□□□□□ -1.87
Nup88Q8CEC0 Gm22225-201ENSMUST00000157358 278 ntBASIC3.4□□□□□ -1.87
Nup88Q8CEC0 Gm22076-201ENSMUST00000158601 84 ntBASIC3.4□□□□□ -1.87
Nup88Q8CEC0 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC3.4□□□□□ -1.87
Nup88Q8CEC0 Gm24713-201ENSMUST00000178850 107 ntBASIC3.4□□□□□ -1.87
Nup88Q8CEC0 Gm25448-201ENSMUST00000180065 107 ntBASIC3.4□□□□□ -1.87
Nup88Q8CEC0 Gm11392-201ENSMUST00000181419 710 ntBASIC3.4□□□□□ -1.87
Nup88Q8CEC0 Gm28650-201ENSMUST00000188413 411 ntBASIC3.4□□□□□ -1.87
Nup88Q8CEC0 Gm38146-201ENSMUST00000194121 1293 ntBASIC3.4□□□□□ -1.87
Nup88Q8CEC0 Gm32222-201ENSMUST00000203296 298 ntBASIC3.4□□□□□ -1.87
Nup88Q8CEC0 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.4□□□□□ -1.87
Nup88Q8CEC0 Gm18015-201ENSMUST00000214879 316 ntBASIC3.4□□□□□ -1.87
Nup88Q8CEC0 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.4□□□□□ -1.87
Nup88Q8CEC0 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Gm3940-201ENSMUST00000105087 432 ntBASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Gm17132-201ENSMUST00000109542 1158 ntBASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Gm12793-201ENSMUST00000119268 292 ntBASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Gm16354-201ENSMUST00000155376 150 ntBASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Gm26101-201ENSMUST00000157246 105 ntBASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Mir7j-201ENSMUST00000184427 122 ntBASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Gm27163-201ENSMUST00000184767 409 ntBASIC3.39□□□□□ -1.87
Nup88Q8CEC0 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Gm37007-201ENSMUST00000194234 319 ntBASIC3.39□□□□□ -1.87
Nup88Q8CEC0 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Gm35931-201ENSMUST00000203931 448 ntBASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Gm44030-201ENSMUST00000204865 432 ntBASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 AC157654.1-201ENSMUST00000224130 820 ntBASIC3.39□□□□□ -1.87
Nup88Q8CEC0 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 n-R5s37-201ENSMUST00000082533 118 ntBASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.39□□□□□ -1.87
Nup88Q8CEC0 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Snord14c-201ENSMUST00000101927 86 ntBASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Mir499-201ENSMUST00000102357 79 ntBASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Gm24068-201ENSMUST00000104513 132 ntBASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Gm23911-201ENSMUST00000104596 134 ntBASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Gm16171-201ENSMUST00000118004 324 ntBASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Gm22452-201ENSMUST00000122804 104 ntBASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Gm25283-201ENSMUST00000157272 77 ntBASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Gm22766-201ENSMUST00000158372 99 ntBASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Gm17186-201ENSMUST00000171742 456 ntBASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Gm26195-201ENSMUST00000175035 101 ntBASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Gm27700-201ENSMUST00000185003 81 ntBASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Gm44399-201ENSMUST00000205043 226 ntBASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Gm44609-201ENSMUST00000207157 460 ntBASIC3.38□□□□□ -1.87
Nup88Q8CEC0 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms