Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm23422-201ENSMUST00000102000 107 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm13343-201ENSMUST00000116474 105 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm14670-201ENSMUST00000117327 337 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm14987-201ENSMUST00000117820 676 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm12693-201ENSMUST00000121965 483 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm25391-201ENSMUST00000157342 134 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm22380-201ENSMUST00000157479 95 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm24008-201ENSMUST00000157733 138 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm25860-201ENSMUST00000158252 126 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm26005-201ENSMUST00000158802 134 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm16569-201ENSMUST00000160526 314 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm9022-202ENSMUST00000183285 483 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm43624-201ENSMUST00000197368 180 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm44030-201ENSMUST00000204865 432 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm17990-201ENSMUST00000211728 553 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm35857-201ENSMUST00000212739 178 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 CT009718.4-201ENSMUST00000221881 109 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 AC126554.1-201ENSMUST00000222161 271 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm25579-201ENSMUST00000083407 106 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.53□□□□□ -1.84
Ubfd1Q78JW9 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
Ubfd1Q78JW9 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
Ubfd1Q78JW9 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.85
Ubfd1Q78JW9 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
Ubfd1Q78JW9 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm23697-201ENSMUST00000103897 110 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm14518-201ENSMUST00000117351 542 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm13650-201ENSMUST00000117729 433 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm13510-201ENSMUST00000118659 429 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm23957-201ENSMUST00000157209 90 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm20450-201ENSMUST00000173652 147 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm26141-201ENSMUST00000175299 126 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm27580-201ENSMUST00000183666 149 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Mir6951-201ENSMUST00000183910 75 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm29350-201ENSMUST00000189141 541 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm9696-202ENSMUST00000191541 830 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm37097-201ENSMUST00000193676 336 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm37523-201ENSMUST00000194901 412 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm37399-201ENSMUST00000195224 416 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm43723-201ENSMUST00000196886 189 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm43955-201ENSMUST00000204332 142 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.52□□□□□ -1.85
Ubfd1Q78JW9 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm12779-201ENSMUST00000121496 143 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm22611-201ENSMUST00000158288 150 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm25653-201ENSMUST00000158473 138 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm25977-201ENSMUST00000158697 85 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Mir6408-201ENSMUST00000183643 91 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm29429-201ENSMUST00000187071 121 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm28654-201ENSMUST00000189801 379 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm44343-201ENSMUST00000196702 90 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm44336-201ENSMUST00000203696 468 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm45080-201ENSMUST00000206648 283 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm45420-201ENSMUST00000211243 425 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm45273-201ENSMUST00000211559 281 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm21007-201ENSMUST00000221024 326 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 108.2 ms