Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC2.11□□□□□ -2.07
Topbp1Q6ZQF0 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.11□□□□□ -2.07
Topbp1Q6ZQF0 Gm43489-201ENSMUST00000196810 993 ntBASIC2.11□□□□□ -2.07
Topbp1Q6ZQF0 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Topbp1Q6ZQF0 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.11□□□□□ -2.07
Topbp1Q6ZQF0 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.11□□□□□ -2.07
Topbp1Q6ZQF0 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Topbp1Q6ZQF0 Gm27921-201ENSMUST00000183968 108 ntBASIC2.1□□□□□ -2.07
Topbp1Q6ZQF0 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC2.1□□□□□ -2.07
Topbp1Q6ZQF0 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.1□□□□□ -2.07
Topbp1Q6ZQF0 Gm24252-201ENSMUST00000083700 132 ntBASIC2.1□□□□□ -2.07
Topbp1Q6ZQF0 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.09□□□□□ -2.07
Topbp1Q6ZQF0 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.09□□□□□ -2.07
Topbp1Q6ZQF0 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.09□□□□□ -2.07
Topbp1Q6ZQF0 Gm22469-201ENSMUST00000104118 133 ntBASIC2.09□□□□□ -2.07
Topbp1Q6ZQF0 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC2.09□□□□□ -2.07
Topbp1Q6ZQF0 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC2.09□□□□□ -2.07
Topbp1Q6ZQF0 Gm26049-201ENSMUST00000157313 108 ntBASIC2.09□□□□□ -2.07
Topbp1Q6ZQF0 Gm22516-201ENSMUST00000158266 124 ntBASIC2.09□□□□□ -2.07
Topbp1Q6ZQF0 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Topbp1Q6ZQF0 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.09□□□□□ -2.07
Topbp1Q6ZQF0 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Topbp1Q6ZQF0 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.09□□□□□ -2.07
Topbp1Q6ZQF0 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Topbp1Q6ZQF0 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.09□□□□□ -2.07
Topbp1Q6ZQF0 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.09□□□□□ -2.07
Topbp1Q6ZQF0 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.09□□□□□ -2.07
Topbp1Q6ZQF0 Gm12891-201ENSMUST00000119358 240 ntBASIC2.08□□□□□ -2.08
Topbp1Q6ZQF0 Gm15452-201ENSMUST00000119877 240 ntBASIC2.08□□□□□ -2.08
Topbp1Q6ZQF0 Gm13409-201ENSMUST00000122072 546 ntBASIC2.08□□□□□ -2.08
Topbp1Q6ZQF0 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Topbp1Q6ZQF0 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.08□□□□□ -2.08
Topbp1Q6ZQF0 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.08□□□□□ -2.08
Topbp1Q6ZQF0 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.08□□□□□ -2.08
Topbp1Q6ZQF0 Gm22519-201ENSMUST00000158270 178 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm8676-201ENSMUST00000184206 637 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm27477-201ENSMUST00000184649 143 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm37708-201ENSMUST00000192337 895 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm38329-201ENSMUST00000193473 427 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm44476-201ENSMUST00000196225 91 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm9440-201ENSMUST00000119667 539 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm11357-201ENSMUST00000119758 954 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm23760-201ENSMUST00000158350 116 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm23340-201ENSMUST00000158955 123 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm3104-201ENSMUST00000171004 473 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm22646-201ENSMUST00000175130 115 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm37281-201ENSMUST00000192412 439 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Mir7217-201ENSMUST00000200304 62 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Gm23850-201ENSMUST00000083830 169 ntBASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Topbp1Q6ZQF0 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.06□□□□□ -2.08
Topbp1Q6ZQF0 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Topbp1Q6ZQF0 Gm14923-201ENSMUST00000118270 155 ntBASIC2.06□□□□□ -2.08
Topbp1Q6ZQF0 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.06□□□□□ -2.08
Topbp1Q6ZQF0 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
Topbp1Q6ZQF0 Gm27248-201ENSMUST00000184004 166 ntBASIC2.06□□□□□ -2.08
Topbp1Q6ZQF0 Gm7751-201ENSMUST00000212868 709 ntBASIC2.06□□□□□ -2.08
Topbp1Q6ZQF0 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.06□□□□□ -2.08
Topbp1Q6ZQF0 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.06□□□□□ -2.08
Topbp1Q6ZQF0 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Topbp1Q6ZQF0 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Topbp1Q6ZQF0 Gm22780-201ENSMUST00000104084 132 ntBASIC2.05□□□□□ -2.08
Topbp1Q6ZQF0 Snord71-201ENSMUST00000104361 85 ntBASIC2.05□□□□□ -2.08
Topbp1Q6ZQF0 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
Topbp1Q6ZQF0 Gm23083-201ENSMUST00000157851 116 ntBASIC2.05□□□□□ -2.08
Topbp1Q6ZQF0 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Topbp1Q6ZQF0 Gm23636-201ENSMUST00000175070 95 ntBASIC2.05□□□□□ -2.08
Topbp1Q6ZQF0 Gm37523-201ENSMUST00000194901 412 ntBASIC2.05□□□□□ -2.08
Topbp1Q6ZQF0 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC2.05□□□□□ -2.08
Topbp1Q6ZQF0 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC2.05□□□□□ -2.08
Topbp1Q6ZQF0 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.05□□□□□ -2.08
Topbp1Q6ZQF0 Mir196b-201ENSMUST00000083509 85 ntBASIC2.05□□□□□ -2.08
Topbp1Q6ZQF0 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Topbp1Q6ZQF0 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.04□□□□□ -2.08
Topbp1Q6ZQF0 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Topbp1Q6ZQF0 Mup-ps21-201ENSMUST00000119998 448 ntBASIC2.04□□□□□ -2.08
Topbp1Q6ZQF0 Gm14215-201ENSMUST00000120578 221 ntBASIC2.04□□□□□ -2.08
Topbp1Q6ZQF0 Gm15488-201ENSMUST00000121682 670 ntBASIC2.04□□□□□ -2.08
Topbp1Q6ZQF0 Gm22843-201ENSMUST00000157710 134 ntBASIC2.04□□□□□ -2.08
Topbp1Q6ZQF0 Gm25365-201ENSMUST00000158852 121 ntBASIC2.04□□□□□ -2.08
Topbp1Q6ZQF0 Gm17064-201ENSMUST00000167690 452 ntBASIC2.04□□□□□ -2.08
Topbp1Q6ZQF0 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Topbp1Q6ZQF0 Mir6393-201ENSMUST00000183709 94 ntBASIC2.04□□□□□ -2.08
Topbp1Q6ZQF0 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.04□□□□□ -2.08
Topbp1Q6ZQF0 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.04□□□□□ -2.08
Topbp1Q6ZQF0 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Topbp1Q6ZQF0 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms