Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm12722-201ENSMUST00000118507 493 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 AA413626-201ENSMUST00000121125 494 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm22956-201ENSMUST00000122520 80 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm22034-201ENSMUST00000157283 134 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm16569-201ENSMUST00000160526 314 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Mir5129-201ENSMUST00000174938 78 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm27332-201ENSMUST00000184893 112 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm37313-201ENSMUST00000191673 290 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm37081-201ENSMUST00000192034 196 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 AC125020.2-201ENSMUST00000218894 348 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm24045-201ENSMUST00000083113 98 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Gm13650-201ENSMUST00000117729 433 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Gm11693-201ENSMUST00000119625 565 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Gm3788-201ENSMUST00000119949 136 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Gm16362-201ENSMUST00000135189 214 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Gm26028-201ENSMUST00000158660 294 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Gm25490-201ENSMUST00000158734 130 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Gm23415-201ENSMUST00000175519 83 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Gm27952-201ENSMUST00000184748 105 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Gm29104-201ENSMUST00000186304 222 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Gm29229-201ENSMUST00000188874 323 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Gm45252-201ENSMUST00000211579 397 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Gm23423-201ENSMUST00000082782 106 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Mir452-201ENSMUST00000093629 85 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.07□□□□□ -1.76
Ddx55Q6ZPL9 Gm14390-201ENSMUST00000117505 1695 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm13664-201ENSMUST00000117304 345 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm13046-201ENSMUST00000117391 501 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm14541-201ENSMUST00000118985 157 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm12118-201ENSMUST00000119766 532 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm26100-201ENSMUST00000157245 127 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm8338-201ENSMUST00000163928 363 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm26622-201ENSMUST00000180520 298 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm27374-201ENSMUST00000183660 81 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm37743-201ENSMUST00000194645 376 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm37575-201ENSMUST00000195467 309 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm34091-201ENSMUST00000200875 604 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm44472-201ENSMUST00000204922 943 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm25475-201ENSMUST00000082825 180 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Gm22423-201ENSMUST00000082861 184 ntBASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms