Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Nup98Q6PFD9 Gm2092-201ENSMUST00000178887 639 ntBASIC1.77□□□□□ -2.13
Nup98Q6PFD9 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Nup98Q6PFD9 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Nup98Q6PFD9 Gm7375-201ENSMUST00000179232 639 ntBASIC1.77□□□□□ -2.13
Nup98Q6PFD9 Gm2759-201ENSMUST00000179938 639 ntBASIC1.77□□□□□ -2.13
Nup98Q6PFD9 Gm3681-201ENSMUST00000179940 639 ntBASIC1.77□□□□□ -2.13
Nup98Q6PFD9 Gm6113-201ENSMUST00000180319 639 ntBASIC1.77□□□□□ -2.13
Nup98Q6PFD9 Mir6394-201ENSMUST00000184738 99 ntBASIC1.77□□□□□ -2.13
Nup98Q6PFD9 Gm37219-201ENSMUST00000192036 926 ntBASIC1.77□□□□□ -2.13
Nup98Q6PFD9 Gm42796-201ENSMUST00000199913 1087 ntBASIC1.77□□□□□ -2.13
Nup98Q6PFD9 Gm44011-201ENSMUST00000203336 394 ntBASIC1.77□□□□□ -2.13
Nup98Q6PFD9 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.77□□□□□ -2.13
Nup98Q6PFD9 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC1.77□□□□□ -2.13
Nup98Q6PFD9 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.76□□□□□ -2.13
Nup98Q6PFD9 Gm17976-201ENSMUST00000184037 1909 ntBASIC1.76□□□□□ -2.13
Nup98Q6PFD9 Gm23083-201ENSMUST00000157851 116 ntBASIC1.76□□□□□ -2.13
Nup98Q6PFD9 Gm44332-201ENSMUST00000203712 433 ntBASIC1.76□□□□□ -2.13
Nup98Q6PFD9 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.76□□□□□ -2.13
Nup98Q6PFD9 Gm22507-201ENSMUST00000082773 160 ntBASIC1.76□□□□□ -2.13
Nup98Q6PFD9 Mir200b-201ENSMUST00000083615 70 ntBASIC1.76□□□□□ -2.13
Nup98Q6PFD9 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.76□□□□□ -2.13
Nup98Q6PFD9 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Nron-204ENSMUST00000158971 370 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Gm17538-201ENSMUST00000168236 327 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Gm37708-201ENSMUST00000192337 895 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Gm45048-201ENSMUST00000207058 429 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 CT025606.1-201ENSMUST00000218273 324 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 AC134254.5-201ENSMUST00000223436 400 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 AC115878.1-201ENSMUST00000227247 334 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Gm6215-201ENSMUST00000119297 1386 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Mir5099-201ENSMUST00000175257 74 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Gm23190-201ENSMUST00000180307 64 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Mir6995-201ENSMUST00000183658 71 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Gm27248-201ENSMUST00000184004 166 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Gm19457-201ENSMUST00000200995 448 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Gm24624-201ENSMUST00000082617 164 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 n-R5s196-201ENSMUST00000083136 117 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Gm23096-201ENSMUST00000083447 107 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Mir30d-201ENSMUST00000083503 82 ntBASIC1.75□□□□□ -2.13
Nup98Q6PFD9 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Gm22843-201ENSMUST00000157710 134 ntBASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Gm23221-201ENSMUST00000158118 93 ntBASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Gm25971-201ENSMUST00000158953 286 ntBASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Gm27582-201ENSMUST00000184084 126 ntBASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Gm27894-201ENSMUST00000184177 92 ntBASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Gm28200-201ENSMUST00000187778 315 ntBASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Gm29378-201ENSMUST00000188723 315 ntBASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Gm28909-201ENSMUST00000189406 315 ntBASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Gm43911-201ENSMUST00000203097 76 ntBASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Gm44478-201ENSMUST00000204875 114 ntBASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Gm44520-201ENSMUST00000205447 802 ntBASIC1.74□□□□□ -2.13
Nup98Q6PFD9 AC126673.2-201ENSMUST00000221052 686 ntBASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Gm26126-201ENSMUST00000083188 164 ntBASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Gm11284-201ENSMUST00000121910 1887 ntBASIC1.74□□□□□ -2.13
Nup98Q6PFD9 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC1.74□□□□□ -2.13
Nup98Q6PFD9 Gm12386-201ENSMUST00000117380 688 ntBASIC1.73□□□□□ -2.13
Nup98Q6PFD9 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Nup98Q6PFD9 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC1.73□□□□□ -2.13
Nup98Q6PFD9 Gm28951-201ENSMUST00000190742 313 ntBASIC1.73□□□□□ -2.13
Nup98Q6PFD9 Gm32033-201ENSMUST00000193483 339 ntBASIC1.73□□□□□ -2.13
Nup98Q6PFD9 AC122194.1-201ENSMUST00000220549 293 ntBASIC1.73□□□□□ -2.13
Nup98Q6PFD9 AC159293.2-201ENSMUST00000222289 424 ntBASIC1.73□□□□□ -2.13
Nup98Q6PFD9 AC140210.1-201ENSMUST00000224961 534 ntBASIC1.73□□□□□ -2.13
Nup98Q6PFD9 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Nup98Q6PFD9 Gm24261-201ENSMUST00000083744 104 ntBASIC1.73□□□□□ -2.13
Nup98Q6PFD9 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
Nup98Q6PFD9 Gm13355-201ENSMUST00000117996 317 ntBASIC1.73□□□□□ -2.13
Nup98Q6PFD9 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC1.73□□□□□ -2.13
Nup98Q6PFD9 Gm22561-201ENSMUST00000157331 84 ntBASIC1.73□□□□□ -2.13
Nup98Q6PFD9 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.73□□□□□ -2.13
Nup98Q6PFD9 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC1.73□□□□□ -2.13
Nup98Q6PFD9 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Nup98Q6PFD9 Gm38278-201ENSMUST00000194715 1365 ntBASIC1.72□□□□□ -2.13
Nup98Q6PFD9 Gm16100-201ENSMUST00000120489 231 ntBASIC1.72□□□□□ -2.13
Nup98Q6PFD9 Gm14069-201ENSMUST00000120815 229 ntBASIC1.72□□□□□ -2.13
Nup98Q6PFD9 Gm22386-201ENSMUST00000158192 129 ntBASIC1.72□□□□□ -2.13
Nup98Q6PFD9 Gm16147-201ENSMUST00000162143 373 ntBASIC1.72□□□□□ -2.13
Nup98Q6PFD9 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.72□□□□□ -2.13
Nup98Q6PFD9 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.72□□□□□ -2.13
Nup98Q6PFD9 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Nup98Q6PFD9 Gm43124-201ENSMUST00000201878 278 ntBASIC1.72□□□□□ -2.13
Nup98Q6PFD9 Gm19540-201ENSMUST00000221843 810 ntBASIC1.72□□□□□ -2.13
Nup98Q6PFD9 Gm24406-201ENSMUST00000083026 128 ntBASIC1.72□□□□□ -2.13
Nup98Q6PFD9 Gm23347-201ENSMUST00000083823 82 ntBASIC1.72□□□□□ -2.13
Nup98Q6PFD9 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Nup98Q6PFD9 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.72□□□□□ -2.13
Nup98Q6PFD9 Gm6429-201ENSMUST00000117144 475 ntBASIC1.71□□□□□ -2.14
Nup98Q6PFD9 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC1.71□□□□□ -2.14
Nup98Q6PFD9 Mir6985-201ENSMUST00000184641 61 ntBASIC1.71□□□□□ -2.14
Nup98Q6PFD9 Gm28191-201ENSMUST00000189112 211 ntBASIC1.71□□□□□ -2.14
Nup98Q6PFD9 Gm38018-201ENSMUST00000195651 540 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms