Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm12985-201ENSMUST00000118376 183 ntBASIC1.05□□□□□ -2.24
Col7a1Q63870 Gm15951-201ENSMUST00000118377 400 ntBASIC1.05□□□□□ -2.24
Col7a1Q63870 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.05□□□□□ -2.24
Col7a1Q63870 Gm29192-201ENSMUST00000190942 377 ntBASIC1.05□□□□□ -2.24
Col7a1Q63870 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC1.05□□□□□ -2.24
Col7a1Q63870 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.05□□□□□ -2.24
Col7a1Q63870 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Col7a1Q63870 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Col7a1Q63870 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.04□□□□□ -2.24
Col7a1Q63870 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Col7a1Q63870 Gm15443-201ENSMUST00000118947 820 ntBASIC1.04□□□□□ -2.24
Col7a1Q63870 Gm12417-201ENSMUST00000119153 403 ntBASIC1.04□□□□□ -2.24
Col7a1Q63870 Gm14238-201ENSMUST00000120227 323 ntBASIC1.04□□□□□ -2.24
Col7a1Q63870 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Col7a1Q63870 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Col7a1Q63870 Gm6788-201ENSMUST00000166459 270 ntBASIC1.04□□□□□ -2.24
Col7a1Q63870 Gm27980-201ENSMUST00000184094 169 ntBASIC1.04□□□□□ -2.24
Col7a1Q63870 Gm29288-201ENSMUST00000191582 901 ntBASIC1.04□□□□□ -2.24
Col7a1Q63870 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.04□□□□□ -2.24
Col7a1Q63870 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Col7a1Q63870 Gm14770-201ENSMUST00000122197 312 ntBASIC1.04□□□□□ -2.24
Col7a1Q63870 Gm26358-201ENSMUST00000158215 97 ntBASIC1.04□□□□□ -2.24
Col7a1Q63870 Gm26171-201ENSMUST00000158422 131 ntBASIC1.04□□□□□ -2.24
Col7a1Q63870 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Col7a1Q63870 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC1.04□□□□□ -2.24
Col7a1Q63870 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC1.04□□□□□ -2.24
Col7a1Q63870 Gm29604-201ENSMUST00000187176 163 ntBASIC1.04□□□□□ -2.24
Col7a1Q63870 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Col7a1Q63870 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Col7a1Q63870 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Col7a1Q63870 Gm25633-201ENSMUST00000178565 107 ntBASIC1.03□□□□□ -2.24
Col7a1Q63870 Gm29597-201ENSMUST00000188035 308 ntBASIC1.03□□□□□ -2.24
Col7a1Q63870 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.03□□□□□ -2.24
Col7a1Q63870 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC1.03□□□□□ -2.24
Col7a1Q63870 Gm45445-201ENSMUST00000209586 232 ntBASIC1.03□□□□□ -2.24
Col7a1Q63870 AC132881.2-201ENSMUST00000225474 709 ntBASIC1.03□□□□□ -2.24
Col7a1Q63870 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC1.03□□□□□ -2.24
Col7a1Q63870 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.03□□□□□ -2.24
Col7a1Q63870 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC1.03□□□□□ -2.24
Col7a1Q63870 Gm24465-201ENSMUST00000178398 107 ntBASIC1.03□□□□□ -2.24
Col7a1Q63870 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.03□□□□□ -2.24
Col7a1Q63870 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Col7a1Q63870 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.02□□□□□ -2.25
Col7a1Q63870 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Col7a1Q63870 Gm5967-201ENSMUST00000172723 494 ntBASIC1.02□□□□□ -2.25
Col7a1Q63870 Gm44634-201ENSMUST00000206119 152 ntBASIC1.02□□□□□ -2.25
Col7a1Q63870 Gm19137-201ENSMUST00000213790 1164 ntBASIC1.02□□□□□ -2.25
Col7a1Q63870 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.02□□□□□ -2.25
Col7a1Q63870 CT009713.4-201ENSMUST00000224246 272 ntBASIC1.02□□□□□ -2.25
Col7a1Q63870 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Col7a1Q63870 Gm13913-201ENSMUST00000121126 260 ntBASIC1.02□□□□□ -2.25
Col7a1Q63870 Gm22447-201ENSMUST00000158155 92 ntBASIC1.02□□□□□ -2.25
Col7a1Q63870 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
Col7a1Q63870 Gm29281-201ENSMUST00000188077 381 ntBASIC1.02□□□□□ -2.25
Col7a1Q63870 Gm19057-201ENSMUST00000194329 1197 ntBASIC1.02□□□□□ -2.25
Col7a1Q63870 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
Col7a1Q63870 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.02□□□□□ -2.25
Col7a1Q63870 Gm11490-201ENSMUST00000118128 272 ntBASIC1.02□□□□□ -2.25
Col7a1Q63870 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Col7a1Q63870 Gm25454-201ENSMUST00000157947 315 ntBASIC1.02□□□□□ -2.25
Col7a1Q63870 Gm25838-201ENSMUST00000158920 120 ntBASIC1.02□□□□□ -2.25
Col7a1Q63870 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Col7a1Q63870 Gm29658-201ENSMUST00000185404 230 ntBASIC1.02□□□□□ -2.25
Col7a1Q63870 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Col7a1Q63870 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC1.02□□□□□ -2.25
Col7a1Q63870 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Col7a1Q63870 Gm36960-201ENSMUST00000195491 2035 ntBASIC1.02□□□□□ -2.25
Col7a1Q63870 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Col7a1Q63870 Gm43404-201ENSMUST00000200424 2534 ntBASIC1.01□□□□□ -2.25
Col7a1Q63870 Mir669f-201ENSMUST00000103850 121 ntBASIC1.01□□□□□ -2.25
Col7a1Q63870 Gm14558-201ENSMUST00000117458 381 ntBASIC1.01□□□□□ -2.25
Col7a1Q63870 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Col7a1Q63870 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC1.01□□□□□ -2.25
Col7a1Q63870 Gm22583-201ENSMUST00000178031 107 ntBASIC1.01□□□□□ -2.25
Col7a1Q63870 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.01□□□□□ -2.25
Col7a1Q63870 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.01□□□□□ -2.25
Col7a1Q63870 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.01□□□□□ -2.25
Col7a1Q63870 Gm44288-201ENSMUST00000205061 2795 ntBASIC1.01□□□□□ -2.25
Col7a1Q63870 Gm12934-201ENSMUST00000119221 343 ntBASIC1.01□□□□□ -2.25
Col7a1Q63870 Gm15143-201ENSMUST00000178180 714 ntBASIC1.01□□□□□ -2.25
Col7a1Q63870 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
Col7a1Q63870 Gm3690-201ENSMUST00000211341 262 ntBASIC1.01□□□□□ -2.25
Col7a1Q63870 Gm35558-202ENSMUST00000221819 499 ntBASIC1.01□□□□□ -2.25
Col7a1Q63870 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.01□□□□□ -2.25
Col7a1Q63870 Gm10088-201ENSMUST00000074116 423 ntBASIC1.01□□□□□ -2.25
Col7a1Q63870 Olfr1193-201ENSMUST00000081697 957 ntBASIC1.01□□□□□ -2.25
Col7a1Q63870 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1□□□□□ -2.25
Col7a1Q63870 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC1□□□□□ -2.25
Col7a1Q63870 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
Col7a1Q63870 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1□□□□□ -2.25
Col7a1Q63870 Mir1197-201ENSMUST00000117037 120 ntBASIC1□□□□□ -2.25
Col7a1Q63870 Gm15065-201ENSMUST00000121699 273 ntBASIC1□□□□□ -2.25
Col7a1Q63870 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC1□□□□□ -2.25
Col7a1Q63870 Gm23152-201ENSMUST00000175322 116 ntBASIC1□□□□□ -2.25
Col7a1Q63870 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC1□□□□□ -2.25
Col7a1Q63870 Mir6904-201ENSMUST00000183443 67 ntBASIC1□□□□□ -2.25
Col7a1Q63870 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC1□□□□□ -2.25
Col7a1Q63870 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC1□□□□□ -2.25
Col7a1Q63870 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Col7a1Q63870 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC0.99□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms