Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm38146-201ENSMUST00000194121 1293 ntBASIC3.42□□□□□ -1.86
Trim27Q62158 Gm43556-201ENSMUST00000196186 681 ntBASIC3.42□□□□□ -1.86
Trim27Q62158 Gm17850-201ENSMUST00000210023 1154 ntBASIC3.42□□□□□ -1.86
Trim27Q62158 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.42□□□□□ -1.86
Trim27Q62158 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trim27Q62158 Gm10212-201ENSMUST00000087884 324 ntBASIC3.42□□□□□ -1.86
Trim27Q62158 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
Trim27Q62158 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.42□□□□□ -1.86
Trim27Q62158 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trim27Q62158 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.41□□□□□ -1.86
Trim27Q62158 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trim27Q62158 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trim27Q62158 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trim27Q62158 Gm14020-201ENSMUST00000118165 662 ntBASIC3.41□□□□□ -1.86
Trim27Q62158 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.41□□□□□ -1.86
Trim27Q62158 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Trim27Q62158 Gm25156-201ENSMUST00000179809 79 ntBASIC3.41□□□□□ -1.86
Trim27Q62158 Mir6371-201ENSMUST00000184470 111 ntBASIC3.41□□□□□ -1.86
Trim27Q62158 Gm5116-201ENSMUST00000187732 463 ntBASIC3.41□□□□□ -1.86
Trim27Q62158 Gm29627-201ENSMUST00000187984 463 ntBASIC3.41□□□□□ -1.86
Trim27Q62158 Gm20915-201ENSMUST00000191575 663 ntBASIC3.41□□□□□ -1.86
Trim27Q62158 Gm37417-201ENSMUST00000195257 454 ntBASIC3.41□□□□□ -1.86
Trim27Q62158 Gm43521-201ENSMUST00000197838 255 ntBASIC3.41□□□□□ -1.86
Trim27Q62158 Gm43107-201ENSMUST00000198729 255 ntBASIC3.41□□□□□ -1.86
Trim27Q62158 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Trim27Q62158 Gm18414-201ENSMUST00000210858 694 ntBASIC3.41□□□□□ -1.86
Trim27Q62158 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.41□□□□□ -1.86
Trim27Q62158 Gm30534-201ENSMUST00000217928 207 ntBASIC3.41□□□□□ -1.86
Trim27Q62158 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.41□□□□□ -1.86
Trim27Q62158 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC3.41□□□□□ -1.86
Trim27Q62158 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trim27Q62158 Gm26458-201ENSMUST00000082832 128 ntBASIC3.41□□□□□ -1.86
Trim27Q62158 Gm23848-201ENSMUST00000083826 106 ntBASIC3.41□□□□□ -1.86
Trim27Q62158 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trim27Q62158 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trim27Q62158 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.41□□□□□ -1.86
Trim27Q62158 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.41□□□□□ -1.86
Trim27Q62158 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trim27Q62158 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trim27Q62158 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trim27Q62158 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.4□□□□□ -1.86
Trim27Q62158 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
Trim27Q62158 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Trim27Q62158 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.4□□□□□ -1.87
Trim27Q62158 Gm25876-201ENSMUST00000104329 119 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.4□□□□□ -1.87
Trim27Q62158 Gm5937-201ENSMUST00000119715 643 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Gm15529-201ENSMUST00000121833 994 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Trim27Q62158 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim27Q62158 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Trim27Q62158 Gm24784-201ENSMUST00000157640 62 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Gm24879-201ENSMUST00000158386 143 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Gm23352-201ENSMUST00000158428 64 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Gm4540-201ENSMUST00000170669 429 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim27Q62158 Gm27755-201ENSMUST00000184623 132 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Gm27249-201ENSMUST00000185049 328 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.4□□□□□ -1.87
Trim27Q62158 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Trim27Q62158 Gm37428-201ENSMUST00000193886 137 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Gm19089-201ENSMUST00000197207 613 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.4□□□□□ -1.87
Trim27Q62158 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Gm7946-201ENSMUST00000203326 958 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Gm44520-201ENSMUST00000205447 802 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Gm44754-201ENSMUST00000208155 400 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim27Q62158 Gm20304-201ENSMUST00000218168 444 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 AC134917.1-201ENSMUST00000220517 1449 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 AC157654.1-201ENSMUST00000224130 820 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trim27Q62158 Gm25856-201ENSMUST00000082786 75 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Gm25411-201ENSMUST00000083760 151 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Gm23741-201ENSMUST00000097237 171 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim27Q62158 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.4□□□□□ -1.87
Trim27Q62158 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trim27Q62158 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim27Q62158 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim27Q62158 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim27Q62158 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim27Q62158 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim27Q62158 Gm25500-201ENSMUST00000104426 123 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 Gm16171-201ENSMUST00000118004 324 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 Gm14877-201ENSMUST00000119803 478 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 Gm12515-201ENSMUST00000120116 361 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 Gm15223-201ENSMUST00000120989 826 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.39□□□□□ -1.87
Trim27Q62158 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC3.39□□□□□ -1.87
Trim27Q62158 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trim27Q62158 Gm24138-201ENSMUST00000157572 114 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 Gm22390-201ENSMUST00000157588 325 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 Gm22330-201ENSMUST00000158068 115 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 Gm17117-201ENSMUST00000163665 299 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim27Q62158 Mir3106-201ENSMUST00000175401 82 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms