Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm27743-201ENSMUST00000185136 126 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm44208-201ENSMUST00000205199 421 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CtcfQ61164 Gm18116-201ENSMUST00000220920 537 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CtcfQ61164 AC154600.1-201ENSMUST00000226480 714 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CtcfQ61164 Gm22740-201ENSMUST00000083439 109 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CtcfQ61164 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CtcfQ61164 Gm25764-201ENSMUST00000104092 134 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm24987-201ENSMUST00000104453 134 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CtcfQ61164 Gm11322-201ENSMUST00000118095 435 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm11798-201ENSMUST00000119150 421 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm11430-201ENSMUST00000121317 217 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm22563-201ENSMUST00000157333 269 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm23716-201ENSMUST00000157348 144 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm22945-201ENSMUST00000158557 157 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CtcfQ61164 Gm20534-201ENSMUST00000172957 172 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm24418-201ENSMUST00000177597 79 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm24639-201ENSMUST00000178518 79 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm26177-201ENSMUST00000178683 107 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm23076-201ENSMUST00000179082 79 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm25077-201ENSMUST00000179157 79 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Mir6385-201ENSMUST00000184295 105 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Mir6993-201ENSMUST00000184912 65 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm28785-201ENSMUST00000187478 379 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.62□□□□□ -1.83
CtcfQ61164 Gm6651-201ENSMUST00000189471 271 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.62□□□□□ -1.83
CtcfQ61164 Gm45048-201ENSMUST00000207058 429 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm45049-201ENSMUST00000207586 591 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm19140-201ENSMUST00000209790 421 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
CtcfQ61164 Gm7751-201ENSMUST00000212868 709 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CtcfQ61164 Gm23932-201ENSMUST00000082914 107 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Gm23093-201ENSMUST00000083450 102 ntBASIC3.62□□□□□ -1.83
CtcfQ61164 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CtcfQ61164 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CtcfQ61164 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CtcfQ61164 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CtcfQ61164 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CtcfQ61164 Gm15177-201ENSMUST00000120491 577 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.61□□□□□ -1.83
CtcfQ61164 Gm22718-201ENSMUST00000122701 315 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 Gm23206-201ENSMUST00000122720 184 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.61□□□□□ -1.83
CtcfQ61164 Gm23168-201ENSMUST00000157156 143 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 Gm26348-201ENSMUST00000157528 240 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 Gm23538-201ENSMUST00000157535 101 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC3.61□□□□□ -1.83
CtcfQ61164 Gm19637-201ENSMUST00000185933 579 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC3.61□□□□□ -1.83
CtcfQ61164 Gm38050-201ENSMUST00000191904 238 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 Gm36984-201ENSMUST00000192770 235 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.61□□□□□ -1.83
CtcfQ61164 Mir7118-201ENSMUST00000197760 61 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.61□□□□□ -1.83
CtcfQ61164 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC3.61□□□□□ -1.83
CtcfQ61164 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.61□□□□□ -1.83
CtcfQ61164 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 AL669916.4-201ENSMUST00000215976 94 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 AL669916.1-201ENSMUST00000217640 94 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 Gm35558-203ENSMUST00000222264 204 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 Gm7984-201ENSMUST00000060640 538 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CtcfQ61164 AF357341-201ENSMUST00000083088 75 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 Gm24610-201ENSMUST00000083270 109 ntBASIC3.61□□□□□ -1.83
CtcfQ61164 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CtcfQ61164 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CtcfQ61164 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CtcfQ61164 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CtcfQ61164 Mir450-2-201ENSMUST00000102444 69 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm24914-201ENSMUST00000157285 313 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm22722-201ENSMUST00000157467 132 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm22833-201ENSMUST00000158292 132 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm25817-201ENSMUST00000177758 121 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm25194-201ENSMUST00000177987 79 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm24766-201ENSMUST00000179182 121 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm24306-201ENSMUST00000180229 79 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm27921-201ENSMUST00000183968 108 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm27648-201ENSMUST00000184315 107 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm27249-201ENSMUST00000185049 328 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm28666-201ENSMUST00000186649 274 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.6□□□□□ -1.83
CtcfQ61164 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms