Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm28356-202ENSMUST00000187566 858 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm20885-201ENSMUST00000190192 654 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm33571-201ENSMUST00000193271 657 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm36866-201ENSMUST00000193343 657 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm36047-201ENSMUST00000193659 657 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm20857-201ENSMUST00000194766 657 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm20858-201ENSMUST00000195459 657 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm30638-201ENSMUST00000195570 656 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm24350-202ENSMUST00000198309 132 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm23925-201ENSMUST00000082471 132 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm24406-201ENSMUST00000083026 128 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm12427-201ENSMUST00000117719 302 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm16017-201ENSMUST00000119834 208 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm22059-201ENSMUST00000157544 104 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm22082-201ENSMUST00000157587 161 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm25605-201ENSMUST00000158364 124 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm24551-201ENSMUST00000158645 92 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm24348-201ENSMUST00000158710 130 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm7592-201ENSMUST00000160674 627 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm25944-201ENSMUST00000178758 94 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Snord43-201ENSMUST00000199549 108 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm7039-201ENSMUST00000205138 346 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm16976-205ENSMUST00000227324 226 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Mir151-201ENSMUST00000083678 68 ntBASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Trav3-1Q5R1I8 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm15526-201ENSMUST00000112504 204 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm11898-201ENSMUST00000117161 385 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Mup-ps20-201ENSMUST00000121132 389 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm26046-201ENSMUST00000157312 166 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm16162-201ENSMUST00000162296 297 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm17038-201ENSMUST00000166586 494 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Mir7037-201ENSMUST00000184414 65 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm43582-201ENSMUST00000196149 343 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm44483-201ENSMUST00000197203 97 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm45551-201ENSMUST00000211459 928 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm8940-201ENSMUST00000212585 219 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 AC127302.1-201ENSMUST00000215973 1111 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm26439-201ENSMUST00000082592 106 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm23932-201ENSMUST00000082914 107 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm24805-201ENSMUST00000082931 104 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm43896-201ENSMUST00000203440 2032 ntBASIC1.13□□□□□ -2.23
Trav3-1Q5R1I8 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm24098-201ENSMUST00000102075 109 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm25381-201ENSMUST00000102078 109 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm22752-201ENSMUST00000102083 109 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm25541-201ENSMUST00000116888 126 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm13731-201ENSMUST00000117332 196 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm14918-201ENSMUST00000118153 268 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm11857-201ENSMUST00000119817 324 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm26275-201ENSMUST00000157101 268 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Mir1949-201ENSMUST00000157434 141 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm23116-201ENSMUST00000158481 67 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm25839-201ENSMUST00000158921 103 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm20698-201ENSMUST00000175657 233 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm25598-201ENSMUST00000179031 107 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Scgb2b6-201ENSMUST00000188132 330 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm7299-201ENSMUST00000194441 581 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm19147-201ENSMUST00000199622 652 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm44519-201ENSMUST00000206486 122 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms