Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gm13341-201ENSMUST00000120780 672 ntBASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Gm7327-201ENSMUST00000120925 652 ntBASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Gm8880-201ENSMUST00000121800 454 ntBASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Gm23980-201ENSMUST00000157135 158 ntBASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Gm25621-201ENSMUST00000157223 114 ntBASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Gm25528-201ENSMUST00000180264 132 ntBASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Gm14596-201ENSMUST00000180268 537 ntBASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Gm14595-201ENSMUST00000180335 537 ntBASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Gm37417-201ENSMUST00000195257 454 ntBASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Gm44391-201ENSMUST00000198490 93 ntBASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Gm42818-201ENSMUST00000198869 987 ntBASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Gm42665-201ENSMUST00000202100 586 ntBASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Gm2436-201ENSMUST00000219562 774 ntBASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Trav6-3Q5R1E6 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm12814-201ENSMUST00000117091 846 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm13614-201ENSMUST00000117306 503 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm15659-201ENSMUST00000118881 341 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Mup-ps10-201ENSMUST00000119626 556 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm11384-201ENSMUST00000121376 303 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm22390-201ENSMUST00000157588 325 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm24241-201ENSMUST00000157787 145 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm20698-201ENSMUST00000175657 233 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm18396-201ENSMUST00000177095 361 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm25451-201ENSMUST00000177832 121 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm24100-201ENSMUST00000178592 79 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm23269-201ENSMUST00000178701 107 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Mir6353-201ENSMUST00000183596 113 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm27869-201ENSMUST00000184327 122 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm29641-201ENSMUST00000188955 259 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm36966-201ENSMUST00000192217 413 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm45173-201ENSMUST00000206819 305 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm8031-201ENSMUST00000213430 626 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm45872-201ENSMUST00000209804 1584 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav6-3Q5R1E6 Gm37063-201ENSMUST00000194678 3520 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Mir190b-201ENSMUST00000104803 80 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm22486-201ENSMUST00000116815 137 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm14657-201ENSMUST00000117461 302 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm12782-201ENSMUST00000117519 727 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm15936-201ENSMUST00000118706 460 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm14292-201ENSMUST00000118761 456 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm23206-201ENSMUST00000122720 184 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm23470-201ENSMUST00000157129 120 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm24212-201ENSMUST00000158258 132 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm26173-201ENSMUST00000158416 136 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm25365-201ENSMUST00000158852 121 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm18417-201ENSMUST00000176564 648 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm22584-201ENSMUST00000177935 92 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm24137-201ENSMUST00000180055 79 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm22391-201ENSMUST00000180356 79 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm37000-201ENSMUST00000193058 428 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm42857-201ENSMUST00000200823 339 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm18160-201ENSMUST00000214279 827 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm7422-201ENSMUST00000220115 640 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2□□□□□ -2.09
Trav6-3Q5R1E6 Gm19563-201ENSMUST00000222031 270 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 AC167192.4-201ENSMUST00000224087 993 ntBASIC2□□□□□ -2.09
Trav6-3Q5R1E6 AC170810.3-201ENSMUST00000226177 374 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms