Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm25373-201ENSMUST00000158156 115 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Nron-204ENSMUST00000158971 370 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Gm3102-201ENSMUST00000164236 489 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.61□□□□□ -1.99
Usp28Q5I043 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Gm24497-201ENSMUST00000177868 191 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Gm25939-201ENSMUST00000179876 191 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Gm27698-201ENSMUST00000184060 249 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Gm37946-201ENSMUST00000192064 347 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Gm42465-201ENSMUST00000197036 492 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Gm44125-201ENSMUST00000203068 448 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Gm44600-201ENSMUST00000208540 111 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Gm29817-201ENSMUST00000210098 172 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Usp28Q5I043 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Usp28Q5I043 Gm23444-201ENSMUST00000082922 191 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Usp28Q5I043 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Usp28Q5I043 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Usp28Q5I043 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Usp28Q5I043 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Usp28Q5I043 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.61□□□□□ -1.99
Usp28Q5I043 Mir190b-201ENSMUST00000104803 80 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm2066-201ENSMUST00000118046 389 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm14359-201ENSMUST00000118883 424 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm14360-201ENSMUST00000120670 393 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm25945-201ENSMUST00000122484 135 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm24627-201ENSMUST00000122764 138 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm9498-201ENSMUST00000140849 291 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm26348-201ENSMUST00000157528 240 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm25866-201ENSMUST00000158245 112 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm24769-201ENSMUST00000158506 129 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm29553-201ENSMUST00000189692 279 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm44212-201ENSMUST00000205016 897 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm46146-201ENSMUST00000217483 346 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm2446-201ENSMUST00000220144 772 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.6□□□□□ -1.99
Usp28Q5I043 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Usp28Q5I043 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Usp28Q5I043 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.6□□□□□ -1.99
Usp28Q5I043 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Usp28Q5I043 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Usp28Q5I043 Gm24836-201ENSMUST00000122609 108 ntBASIC2.59□□□□□ -1.99
Usp28Q5I043 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC2.59□□□□□ -1.99
Usp28Q5I043 Gm28399-201ENSMUST00000186221 318 ntBASIC2.59□□□□□ -1.99
Usp28Q5I043 Gm28572-201ENSMUST00000187444 318 ntBASIC2.59□□□□□ -1.99
Usp28Q5I043 Gm6651-201ENSMUST00000189471 271 ntBASIC2.59□□□□□ -1.99
Usp28Q5I043 Gm19498-201ENSMUST00000191128 331 ntBASIC2.59□□□□□ -1.99
Usp28Q5I043 Gm37979-201ENSMUST00000193065 712 ntBASIC2.59□□□□□ -1.99
Usp28Q5I043 Gm37987-201ENSMUST00000194999 825 ntBASIC2.59□□□□□ -1.99
Usp28Q5I043 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.59□□□□□ -1.99
Usp28Q5I043 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC2.59□□□□□ -1.99
Usp28Q5I043 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.59□□□□□ -1.99
Usp28Q5I043 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.59□□□□□ -1.99
Usp28Q5I043 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.59□□□□□ -1.99
Usp28Q5I043 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Usp28Q5I043 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.59□□□□□ -1.99
Usp28Q5I043 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.59□□□□□ -1.99
Usp28Q5I043 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Usp28Q5I043 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Usp28Q5I043 Gm25796-201ENSMUST00000082645 163 ntBASIC2.59□□□□□ -1.99
Usp28Q5I043 Gm25404-201ENSMUST00000082970 107 ntBASIC2.59□□□□□ -1.99
Usp28Q5I043 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Usp28Q5I043 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Usp28Q5I043 Gm45872-201ENSMUST00000209804 1584 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Gm22091-201ENSMUST00000116908 127 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Gm13046-201ENSMUST00000117391 501 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Gm11356-201ENSMUST00000118974 192 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Gm14841-201ENSMUST00000121067 758 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Gm25270-201ENSMUST00000122606 138 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Usp28Q5I043 Gm24691-201ENSMUST00000157762 140 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Gm26041-201ENSMUST00000158148 108 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Gm16561-201ENSMUST00000163001 192 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.58□□□□□ -2
Usp28Q5I043 Gm23053-201ENSMUST00000175136 96 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Gm37000-201ENSMUST00000193058 428 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Gm43224-201ENSMUST00000201567 898 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Gm44282-201ENSMUST00000203199 190 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Usp28Q5I043 Gm46389-201ENSMUST00000223199 392 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Usp28Q5I043 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.58□□□□□ -2
Usp28Q5I043 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms