Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Mir211-201ENSMUST00000083651 106 ntBASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Gm25005-201ENSMUST00000083812 156 ntBASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Gm13082-201ENSMUST00000118877 561 ntBASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Gm23221-201ENSMUST00000158118 93 ntBASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Mir6995-201ENSMUST00000183658 71 ntBASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Gm37417-201ENSMUST00000195257 454 ntBASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Gm7407-201ENSMUST00000208301 568 ntBASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Gm8935-202ENSMUST00000105727 1959 ntBASIC2.25□□□□□ -2.05
Ccdc88bQ4QRL3 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Ccdc88bQ4QRL3 Gm26421-201ENSMUST00000104279 132 ntBASIC2.25□□□□□ -2.05
Ccdc88bQ4QRL3 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC2.25□□□□□ -2.05
Ccdc88bQ4QRL3 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC2.25□□□□□ -2.05
Ccdc88bQ4QRL3 Gm25080-201ENSMUST00000082526 107 ntBASIC2.25□□□□□ -2.05
Ccdc88bQ4QRL3 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.24□□□□□ -2.05
Ccdc88bQ4QRL3 Gm11433-201ENSMUST00000118318 228 ntBASIC2.24□□□□□ -2.05
Ccdc88bQ4QRL3 Gm23476-201ENSMUST00000158881 274 ntBASIC2.24□□□□□ -2.05
Ccdc88bQ4QRL3 Gm27921-201ENSMUST00000183968 108 ntBASIC2.24□□□□□ -2.05
Ccdc88bQ4QRL3 Gm37993-201ENSMUST00000195301 988 ntBASIC2.24□□□□□ -2.05
Ccdc88bQ4QRL3 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc88bQ4QRL3 Mir219b-201ENSMUST00000198317 65 ntBASIC2.24□□□□□ -2.05
Ccdc88bQ4QRL3 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ccdc88bQ4QRL3 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Ccdc88bQ4QRL3 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.23□□□□□ -2.05
Ccdc88bQ4QRL3 Gm14898-201ENSMUST00000120202 645 ntBASIC2.23□□□□□ -2.05
Ccdc88bQ4QRL3 Gm25339-201ENSMUST00000157458 232 ntBASIC2.23□□□□□ -2.05
Ccdc88bQ4QRL3 Gm22945-201ENSMUST00000158557 157 ntBASIC2.23□□□□□ -2.05
Ccdc88bQ4QRL3 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.23□□□□□ -2.05
Ccdc88bQ4QRL3 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.23□□□□□ -2.05
Ccdc88bQ4QRL3 Gm44358-201ENSMUST00000196301 98 ntBASIC2.23□□□□□ -2.05
Ccdc88bQ4QRL3 Gm45048-201ENSMUST00000207058 429 ntBASIC2.23□□□□□ -2.05
Ccdc88bQ4QRL3 AC135019.1-201ENSMUST00000219949 307 ntBASIC2.23□□□□□ -2.05
Ccdc88bQ4QRL3 Gm9628-201ENSMUST00000222169 725 ntBASIC2.23□□□□□ -2.05
Ccdc88bQ4QRL3 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.23□□□□□ -2.05
Ccdc88bQ4QRL3 Gm15095-201ENSMUST00000118996 1430 ntBASIC2.23□□□□□ -2.05
Ccdc88bQ4QRL3 Gm14390-201ENSMUST00000117505 1695 ntBASIC2.22□□□□□ -2.05
Ccdc88bQ4QRL3 Gm11350-201ENSMUST00000121436 870 ntBASIC2.22□□□□□ -2.05
Ccdc88bQ4QRL3 Gm23008-201ENSMUST00000158946 80 ntBASIC2.22□□□□□ -2.05
Ccdc88bQ4QRL3 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Ccdc88bQ4QRL3 Gm6059-201ENSMUST00000196903 340 ntBASIC2.22□□□□□ -2.05
Ccdc88bQ4QRL3 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC2.22□□□□□ -2.05
Ccdc88bQ4QRL3 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.22□□□□□ -2.05
Ccdc88bQ4QRL3 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.22□□□□□ -2.05
Ccdc88bQ4QRL3 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.22□□□□□ -2.05
Ccdc88bQ4QRL3 Gm16261-201ENSMUST00000096813 205 ntBASIC2.22□□□□□ -2.05
Ccdc88bQ4QRL3 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ccdc88bQ4QRL3 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ccdc88bQ4QRL3 Gm12372-201ENSMUST00000121654 768 ntBASIC2.21□□□□□ -2.06
Ccdc88bQ4QRL3 Gm26099-201ENSMUST00000157248 109 ntBASIC2.21□□□□□ -2.06
Ccdc88bQ4QRL3 Gm25715-201ENSMUST00000158627 125 ntBASIC2.21□□□□□ -2.06
Ccdc88bQ4QRL3 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ccdc88bQ4QRL3 Gm43739-201ENSMUST00000198294 307 ntBASIC2.21□□□□□ -2.06
Ccdc88bQ4QRL3 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.21□□□□□ -2.06
Ccdc88bQ4QRL3 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.21□□□□□ -2.06
Ccdc88bQ4QRL3 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 Gm15125-201ENSMUST00000116185 800 ntBASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 Gm14927-201ENSMUST00000120283 454 ntBASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 Gm22389-201ENSMUST00000158193 301 ntBASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 Gm11395-201ENSMUST00000181011 499 ntBASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 Gm27520-201ENSMUST00000184872 81 ntBASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.2□□□□□ -2.06
Ccdc88bQ4QRL3 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Ccdc88bQ4QRL3 Gm9440-201ENSMUST00000119667 539 ntBASIC2.19□□□□□ -2.06
Ccdc88bQ4QRL3 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Ccdc88bQ4QRL3 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Ccdc88bQ4QRL3 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.19□□□□□ -2.06
Ccdc88bQ4QRL3 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC2.19□□□□□ -2.06
Ccdc88bQ4QRL3 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC2.19□□□□□ -2.06
Ccdc88bQ4QRL3 Mir7079-201ENSMUST00000184697 69 ntBASIC2.19□□□□□ -2.06
Ccdc88bQ4QRL3 Gm44634-201ENSMUST00000206119 152 ntBASIC2.19□□□□□ -2.06
Ccdc88bQ4QRL3 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.19□□□□□ -2.06
Ccdc88bQ4QRL3 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Ccdc88bQ4QRL3 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Ccdc88bQ4QRL3 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Ccdc88bQ4QRL3 Gm14867-201ENSMUST00000120156 866 ntBASIC2.18□□□□□ -2.06
Ccdc88bQ4QRL3 Gm22340-201ENSMUST00000157717 114 ntBASIC2.18□□□□□ -2.06
Ccdc88bQ4QRL3 Gm25768-201ENSMUST00000158570 98 ntBASIC2.18□□□□□ -2.06
Ccdc88bQ4QRL3 Gm3851-201ENSMUST00000168653 318 ntBASIC2.18□□□□□ -2.06
Ccdc88bQ4QRL3 Gm17113-201ENSMUST00000170118 171 ntBASIC2.18□□□□□ -2.06
Ccdc88bQ4QRL3 Gm45192-201ENSMUST00000206749 283 ntBASIC2.18□□□□□ -2.06
Ccdc88bQ4QRL3 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.18□□□□□ -2.06
Ccdc88bQ4QRL3 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.18□□□□□ -2.06
Ccdc88bQ4QRL3 Gm9068-201ENSMUST00000217393 455 ntBASIC2.18□□□□□ -2.06
Ccdc88bQ4QRL3 Gm22740-201ENSMUST00000083439 109 ntBASIC2.18□□□□□ -2.06
Ccdc88bQ4QRL3 Gm25409-201ENSMUST00000083764 131 ntBASIC2.18□□□□□ -2.06
Ccdc88bQ4QRL3 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Ccdc88bQ4QRL3 Mir147-201ENSMUST00000102354 79 ntBASIC2.17□□□□□ -2.06
Ccdc88bQ4QRL3 Gm26278-201ENSMUST00000157098 132 ntBASIC2.17□□□□□ -2.06
Ccdc88bQ4QRL3 Gm22923-201ENSMUST00000174952 110 ntBASIC2.17□□□□□ -2.06
Ccdc88bQ4QRL3 Gm6801-201ENSMUST00000190697 339 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms