Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Mir8103-201ENSMUST00000183945 107 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm31123-201ENSMUST00000192094 666 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm37550-201ENSMUST00000193230 463 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm37616-201ENSMUST00000193974 322 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm43804-201ENSMUST00000198280 456 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.77□□□□□ -1.97
Trim40Q3UWA4 AC174797.3-202ENSMUST00000224578 587 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 AC129208.2-201ENSMUST00000228506 320 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm22229-201ENSMUST00000082987 108 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm23297-201ENSMUST00000083184 127 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm26108-201ENSMUST00000083973 191 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm5670-201ENSMUST00000093546 372 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trim40Q3UWA4 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trim40Q3UWA4 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm13541-201ENSMUST00000119519 283 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm12368-201ENSMUST00000122251 434 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm14562-201ENSMUST00000129885 543 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm23981-201ENSMUST00000157136 106 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm25283-201ENSMUST00000157272 77 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm24552-201ENSMUST00000158646 103 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm22858-201ENSMUST00000174972 76 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm26195-201ENSMUST00000175035 101 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm24713-201ENSMUST00000178850 107 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm25448-201ENSMUST00000180065 107 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm26652-202ENSMUST00000181672 475 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm29192-201ENSMUST00000190942 377 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm37007-201ENSMUST00000194234 319 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm17906-201ENSMUST00000202480 901 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm44399-201ENSMUST00000205043 226 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm44600-201ENSMUST00000208540 111 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm45687-201ENSMUST00000209454 155 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm45387-201ENSMUST00000209792 632 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Olfr936-202ENSMUST00000216912 937 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm22979-201ENSMUST00000082609 159 ntBASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trim40Q3UWA4 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trim40Q3UWA4 AC124426.1-203ENSMUST00000221814 1362 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm24792-201ENSMUST00000104286 128 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm25272-201ENSMUST00000104293 128 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm25727-201ENSMUST00000104522 131 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm14049-201ENSMUST00000121009 636 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm25621-201ENSMUST00000157223 114 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm23326-201ENSMUST00000157419 105 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm24784-201ENSMUST00000157640 62 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm24439-201ENSMUST00000157894 117 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm23895-201ENSMUST00000158108 160 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm22841-201ENSMUST00000158443 62 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm23409-201ENSMUST00000158516 237 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm17538-201ENSMUST00000168236 327 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm27773-201ENSMUST00000184087 78 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm27893-201ENSMUST00000184408 194 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm27330-201ENSMUST00000184689 132 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm9696-202ENSMUST00000191541 830 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Trim40Q3UWA4 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm2676-201ENSMUST00000207279 606 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm2059-201ENSMUST00000212025 287 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.75□□□□□ -1.97
Trim40Q3UWA4 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm24533-201ENSMUST00000083138 196 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm23650-201ENSMUST00000083355 70 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.75□□□□□ -1.97
Trim40Q3UWA4 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Trim40Q3UWA4 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms