Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm24771-201ENSMUST00000158508 137 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm16584-201ENSMUST00000159267 189 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm22853-201ENSMUST00000174974 131 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm27599-201ENSMUST00000183758 174 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm27608-201ENSMUST00000184822 162 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm28956-201ENSMUST00000189047 427 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm37599-201ENSMUST00000193067 489 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm44476-201ENSMUST00000196225 91 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm19202-201ENSMUST00000198096 808 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm18252-203ENSMUST00000215855 757 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm31849-201ENSMUST00000220306 375 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm25856-201ENSMUST00000082786 75 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Upf3aQ3ULJ3 Gm13640-201ENSMUST00000118445 264 ntBASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Gm16289-201ENSMUST00000162079 183 ntBASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Gm17072-201ENSMUST00000166673 658 ntBASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Zfp950-206ENSMUST00000178819 171 ntBASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Gm27161-201ENSMUST00000183960 562 ntBASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Gm19257-201ENSMUST00000186121 183 ntBASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Gm28926-201ENSMUST00000191063 680 ntBASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Gm37732-201ENSMUST00000194377 316 ntBASIC2.58□□□□□ -2
Upf3aQ3ULJ3 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.58□□□□□ -2
Upf3aQ3ULJ3 AC168880.1-201ENSMUST00000225113 707 ntBASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Gm24622-201ENSMUST00000082619 162 ntBASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Gm25130-201ENSMUST00000082650 156 ntBASIC2.58□□□□□ -2
Upf3aQ3ULJ3 n-R5s79-201ENSMUST00000083071 120 ntBASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Upf3aQ3ULJ3 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.58□□□□□ -2
Upf3aQ3ULJ3 Mir466n-201ENSMUST00000104798 94 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm14943-201ENSMUST00000118056 546 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm14469-201ENSMUST00000118363 202 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm14566-201ENSMUST00000118915 321 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm14982-201ENSMUST00000121102 442 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm15536-201ENSMUST00000121411 114 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm4916-201ENSMUST00000126139 642 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm23600-201ENSMUST00000157260 71 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm24768-201ENSMUST00000158512 94 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm3221-201ENSMUST00000164869 440 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm24968-201ENSMUST00000179817 107 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm28412-201ENSMUST00000187243 177 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm7858-201ENSMUST00000190177 622 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm42818-201ENSMUST00000198869 987 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm2676-201ENSMUST00000207279 606 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Upf3aQ3ULJ3 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm22578-201ENSMUST00000083730 107 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Upf3aQ3ULJ3 Gm23472-201ENSMUST00000101806 191 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm25213-201ENSMUST00000102388 113 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Mir669d-201ENSMUST00000104644 121 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Mir344e-201ENSMUST00000104677 66 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm12368-201ENSMUST00000122251 434 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm23463-201ENSMUST00000122468 99 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm22143-201ENSMUST00000157401 203 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm24198-201ENSMUST00000157812 108 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm23473-201ENSMUST00000158883 116 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Spanxn4-201ENSMUST00000172433 424 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm20415-201ENSMUST00000172877 423 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm24757-201ENSMUST00000176987 371 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm24497-201ENSMUST00000177868 191 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms