Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm29573-201ENSMUST00000190291 919 ntBASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm7726-201ENSMUST00000206241 231 ntBASIC1.72□□□□□ -2.13
Spg11Q3UHA3 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.72□□□□□ -2.13
Spg11Q3UHA3 AC158631.1-201ENSMUST00000219202 138 ntBASIC1.72□□□□□ -2.13
Spg11Q3UHA3 CT025525.2-201ENSMUST00000227743 423 ntBASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm23517-201ENSMUST00000082830 192 ntBASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm43896-201ENSMUST00000203440 2032 ntBASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Spg11Q3UHA3 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm13731-201ENSMUST00000117332 196 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm13510-201ENSMUST00000118659 429 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm13059-201ENSMUST00000119881 398 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm12372-201ENSMUST00000121654 768 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Spg11Q3UHA3 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm23328-201ENSMUST00000157418 132 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm27535-201ENSMUST00000183814 157 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.71□□□□□ -2.14
Spg11Q3UHA3 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm37692-201ENSMUST00000192633 232 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm18855-201ENSMUST00000206689 570 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 AC131743.3-201ENSMUST00000222099 662 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm22978-201ENSMUST00000082607 160 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Mir141-201ENSMUST00000083540 72 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 BC051076-202ENSMUST00000199477 2868 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm13228-201ENSMUST00000118937 634 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm18406-201ENSMUST00000185872 669 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm28724-202ENSMUST00000194218 295 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm15235-201ENSMUST00000200572 194 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC1.71□□□□□ -2.14
Spg11Q3UHA3 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Spg11Q3UHA3 Gm7648-201ENSMUST00000173036 1658 ntBASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Gm6185-201ENSMUST00000193379 3553 ntBASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Gm25555-201ENSMUST00000158078 111 ntBASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Gm2389-201ENSMUST00000160487 189 ntBASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC1.7□□□□□ -2.14
Spg11Q3UHA3 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Gm20415-201ENSMUST00000172877 423 ntBASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Gm23151-201ENSMUST00000178061 107 ntBASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC1.7□□□□□ -2.14
Spg11Q3UHA3 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Gm6373-201ENSMUST00000121026 360 ntBASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Gm16129-201ENSMUST00000152628 486 ntBASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Gm23760-201ENSMUST00000158350 116 ntBASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Gm27608-201ENSMUST00000184822 162 ntBASIC1.7□□□□□ -2.14
Spg11Q3UHA3 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Gm18861-201ENSMUST00000202509 1186 ntBASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Gm44052-201ENSMUST00000203382 396 ntBASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Gm44615-201ENSMUST00000206548 358 ntBASIC1.7□□□□□ -2.14
Spg11Q3UHA3 Gm17911-201ENSMUST00000210806 877 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms