Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm11352-201ENSMUST00000119264 517 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Gm13482-201ENSMUST00000119842 254 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 DQ267100-201ENSMUST00000122600 72 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Gm22141-201ENSMUST00000157403 277 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Gm17166-201ENSMUST00000172006 431 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Gm27532-201ENSMUST00000183726 113 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Mir8103-201ENSMUST00000183945 107 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Mir6382-201ENSMUST00000184055 110 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Gm43556-201ENSMUST00000196186 681 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 AC112274.2-201ENSMUST00000218436 170 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Gm19563-201ENSMUST00000222031 270 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 AC167192.1-201ENSMUST00000225908 139 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Gm6030-201ENSMUST00000078768 402 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Trafd1Q3UDK1 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
Trafd1Q3UDK1 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm12770-201ENSMUST00000121734 462 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm11471-201ENSMUST00000121824 198 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm23538-201ENSMUST00000157535 101 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm24691-201ENSMUST00000157762 140 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm26041-201ENSMUST00000158148 108 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm24681-201ENSMUST00000158760 107 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm11392-201ENSMUST00000181419 710 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Mir7242-201ENSMUST00000183710 79 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm27786-201ENSMUST00000184337 70 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm28283-201ENSMUST00000185509 178 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm28802-201ENSMUST00000188624 944 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm6651-201ENSMUST00000189471 271 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm37692-201ENSMUST00000192633 232 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm37732-201ENSMUST00000194377 316 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm19457-201ENSMUST00000200995 448 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm43026-201ENSMUST00000202972 325 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm45173-201ENSMUST00000206819 305 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm18160-201ENSMUST00000214279 827 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm20304-201ENSMUST00000218168 444 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.71□□□□□ -1.98
Trafd1Q3UDK1 Gm42942-201ENSMUST00000196086 1328 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm22076-201ENSMUST00000158601 84 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm24551-201ENSMUST00000158645 92 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm25365-201ENSMUST00000158852 121 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm23619-201ENSMUST00000178411 94 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm25474-201ENSMUST00000179052 94 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm22047-201ENSMUST00000179176 94 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm27921-201ENSMUST00000183968 108 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Mir7j-201ENSMUST00000184427 122 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm18185-201ENSMUST00000186725 667 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm37845-201ENSMUST00000194977 355 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm37417-201ENSMUST00000195257 454 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm43541-201ENSMUST00000197208 581 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm44903-201ENSMUST00000206840 130 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm45105-201ENSMUST00000207824 397 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 AL935138.1-201ENSMUST00000215309 196 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm2628-201ENSMUST00000218019 426 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms