Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm45387-201ENSMUST00000209792 632 ntBASIC4.39□□□□□ -1.71
Ddb1Q3U1J4 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC4.39□□□□□ -1.71
Ddb1Q3U1J4 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Ddb1Q3U1J4 Gm25755-201ENSMUST00000083396 107 ntBASIC4.39□□□□□ -1.71
Ddb1Q3U1J4 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.39□□□□□ -1.71
Ddb1Q3U1J4 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.39□□□□□ -1.71
Ddb1Q3U1J4 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.39□□□□□ -1.71
Ddb1Q3U1J4 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ddb1Q3U1J4 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Gm24119-201ENSMUST00000103979 246 ntBASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Gm11923-201ENSMUST00000118135 508 ntBASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Gm12787-201ENSMUST00000119234 396 ntBASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Gm22136-201ENSMUST00000158751 268 ntBASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Gm20672-201ENSMUST00000176605 261 ntBASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Gm43083-201ENSMUST00000199594 476 ntBASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Gm5670-201ENSMUST00000093546 372 ntBASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.38□□□□□ -1.71
Ddb1Q3U1J4 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm24889-201ENSMUST00000104388 132 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Mir1195-201ENSMUST00000116818 98 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm11784-201ENSMUST00000118568 474 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm15037-201ENSMUST00000120358 259 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm12578-201ENSMUST00000121244 417 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm23016-201ENSMUST00000158431 62 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm26215-201ENSMUST00000158584 139 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm24518-201ENSMUST00000180275 94 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm27477-201ENSMUST00000184649 143 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm21673-201ENSMUST00000186640 436 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm21135-201ENSMUST00000189023 436 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm28506-201ENSMUST00000189937 150 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm7837-201ENSMUST00000190873 412 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm37568-201ENSMUST00000191755 364 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm45317-201ENSMUST00000210385 223 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm25079-201ENSMUST00000082529 203 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm26056-201ENSMUST00000083043 104 ntBASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ddb1Q3U1J4 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm14816-201ENSMUST00000117174 294 ntBASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm14868-201ENSMUST00000117840 216 ntBASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm11798-201ENSMUST00000119150 421 ntBASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm14736-201ENSMUST00000121470 336 ntBASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm23867-201ENSMUST00000122649 274 ntBASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm22849-201ENSMUST00000157713 307 ntBASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm22434-201ENSMUST00000158549 122 ntBASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm22945-201ENSMUST00000158557 157 ntBASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm27580-201ENSMUST00000183666 149 ntBASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm27332-201ENSMUST00000184893 112 ntBASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm38332-201ENSMUST00000194189 147 ntBASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm43472-201ENSMUST00000200175 154 ntBASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm45006-201ENSMUST00000206078 690 ntBASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.36□□□□□ -1.71
Ddb1Q3U1J4 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.35□□□□□ -1.71
Ddb1Q3U1J4 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ddb1Q3U1J4 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms