Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm3027-201ENSMUST00000167579 451 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm3104-201ENSMUST00000171004 473 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm25999-201ENSMUST00000175398 133 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm29147-201ENSMUST00000186846 315 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm28860-201ENSMUST00000188103 313 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm19774-201ENSMUST00000190667 114 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm28160-201ENSMUST00000191229 315 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm32175-201ENSMUST00000193641 346 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm38332-201ENSMUST00000194189 147 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Mir129b-201ENSMUST00000197461 65 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm45031-201ENSMUST00000206800 288 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm45119-201ENSMUST00000207612 199 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 CT009718.4-201ENSMUST00000221881 109 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 AC151833.1-201ENSMUST00000227752 574 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Mir34b-201ENSMUST00000083558 84 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm25207-201ENSMUST00000093745 107 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.81□□□□□ -1.8
Usp39Q3TIX9 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm23271-201ENSMUST00000104052 124 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Mir743b-201ENSMUST00000104751 77 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm14774-201ENSMUST00000117857 536 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm14792-201ENSMUST00000119725 258 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm25104-201ENSMUST00000122476 163 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm23957-201ENSMUST00000157209 90 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm23198-201ENSMUST00000158811 91 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm22398-201ENSMUST00000174941 125 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm25731-201ENSMUST00000175167 125 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm7958-201ENSMUST00000178255 468 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm7950-201ENSMUST00000179633 468 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm24968-201ENSMUST00000179817 107 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm29334-201ENSMUST00000190334 357 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Ighv1-6-201ENSMUST00000193849 293 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm43407-201ENSMUST00000199816 317 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm19177-201ENSMUST00000204520 613 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Usp39Q3TIX9 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Usp39Q3TIX9 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Gm24281-201ENSMUST00000104234 136 ntBASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Gm15151-201ENSMUST00000117106 177 ntBASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Gm2066-201ENSMUST00000118046 389 ntBASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Gm15799-201ENSMUST00000120899 289 ntBASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Gm11849-201ENSMUST00000121293 261 ntBASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Gm23753-201ENSMUST00000157575 149 ntBASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Gm24998-201ENSMUST00000157908 89 ntBASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Gm26400-201ENSMUST00000175012 85 ntBASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Gm27410-201ENSMUST00000183851 115 ntBASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Gm45005-201ENSMUST00000206640 157 ntBASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Gm6112-201ENSMUST00000208037 629 ntBASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.79□□□□□ -1.8
Usp39Q3TIX9 Gm33654-201ENSMUST00000221704 215 ntBASIC3.79□□□□□ -1.8
Usp39Q3TIX9 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms