Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm12876-201ENSMUST00000120975 408 ntBASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm25621-201ENSMUST00000157223 114 ntBASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm24730-201ENSMUST00000158228 117 ntBASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Mir6386-201ENSMUST00000183558 104 ntBASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm27527-201ENSMUST00000183903 99 ntBASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm27582-201ENSMUST00000184084 126 ntBASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm5268-201ENSMUST00000189212 940 ntBASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm6801-201ENSMUST00000190697 339 ntBASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm37568-201ENSMUST00000191755 364 ntBASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm32340-201ENSMUST00000192883 259 ntBASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm42665-201ENSMUST00000202100 586 ntBASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm43932-201ENSMUST00000204499 52 ntBASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm20304-201ENSMUST00000218168 444 ntBASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Gm22810-201ENSMUST00000082741 158 ntBASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ptchd3Q0EEE2 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Mir542-201ENSMUST00000102186 85 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm22115-201ENSMUST00000103976 133 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm23923-201ENSMUST00000104108 133 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm25526-201ENSMUST00000104332 132 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm8217-201ENSMUST00000119136 465 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm12723-201ENSMUST00000120700 451 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm14694-201ENSMUST00000121856 282 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm7209-201ENSMUST00000122339 333 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm25784-201ENSMUST00000122524 81 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm24876-201ENSMUST00000158780 92 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm24736-201ENSMUST00000158862 130 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm6264-202ENSMUST00000162896 1217 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm26195-201ENSMUST00000175035 101 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21842-201ENSMUST00000177552 498 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21626-201ENSMUST00000177791 498 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21562-201ENSMUST00000177888 498 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21539-201ENSMUST00000177925 498 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm17522-201ENSMUST00000178144 498 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21599-201ENSMUST00000178249 498 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21914-201ENSMUST00000178452 498 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21723-201ENSMUST00000178692 498 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21916-201ENSMUST00000178771 498 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21801-201ENSMUST00000178865 498 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21633-201ENSMUST00000178941 498 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21821-201ENSMUST00000179646 498 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21726-201ENSMUST00000179654 392 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21588-201ENSMUST00000180074 498 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21780-201ENSMUST00000180128 498 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21572-201ENSMUST00000180134 498 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm21529-201ENSMUST00000180175 498 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm29370-202ENSMUST00000187476 499 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm37641-201ENSMUST00000193837 239 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm25203-202ENSMUST00000200458 216 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm15235-201ENSMUST00000200572 194 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Gm25203-201ENSMUST00000082842 215 ntBASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
Ptchd3Q0EEE2 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.79□□□□□ -1.96
Ptchd3Q0EEE2 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Ptchd3Q0EEE2 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Ptchd3Q0EEE2 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.79□□□□□ -1.96
Ptchd3Q0EEE2 Mir465c-2-201ENSMUST00000104757 81 ntBASIC2.79□□□□□ -1.96
Ptchd3Q0EEE2 Gm17132-201ENSMUST00000109542 1158 ntBASIC2.79□□□□□ -1.96
Ptchd3Q0EEE2 Gm14020-201ENSMUST00000118165 662 ntBASIC2.79□□□□□ -1.96
Ptchd3Q0EEE2 Gm12096-201ENSMUST00000121149 829 ntBASIC2.79□□□□□ -1.96
Ptchd3Q0EEE2 Gm14389-201ENSMUST00000140453 241 ntBASIC2.79□□□□□ -1.96
Ptchd3Q0EEE2 Gm16354-201ENSMUST00000155376 150 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms